Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since 2003. The cutoff date is August 1st, 2003.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdayIDP2428  :
6.02
GRMZM2G019812
    Variation: March 31st, 2005
Gene Model: January 16th, 2020
3 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Gene Product: August 25th, 2017
Variation: June 29th, 2005
3 days agod3 dwarf plant3: like d1, plant short and compact; "d2" mutation(s) are allelic (d2 is lapsed)
9.03
GRMZM2G093195
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Gene Product: August 15th, 2012
Variation: May 19th, 2006
Gene Model: August 15th, 2012
3 days agohcf108 high chlorophyll fluorescence108: ATPase-deficient
5.01
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: September 1st, 2003
3 days agona2 nana plant2: like na1
5.03
GRMZM2G057000
Incognito, SJP et al. 2020. Euphytica 216:20   AT3G19820 (TAIR) Reference: January 14th, 2020
Gene Product: June 13th, 2016
Variation: June 13th, 2016
Gene Model: June 13th, 2016
3 days agotua3 alpha tubulin3: alpha tubulin family; mRNA expressed in all dividing cells examined; gene specific cDNA probe
5.01
AC195340.3_FG001
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Gene Product: September 1st, 2003
Variation: August 13th, 2013
Gene Model: August 24th, 2014
3 days agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: June 15th, 2018
Gene Model: June 15th, 2018
3 days agozmm31 Zea mays MADS31:
5.01
GRMZM2G071620
Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: August 7th, 2008
Gene Model: July 2nd, 2014
3 days agod*-3010 dwarf candidate3010: andromonoecious, GA3 responsive, prospective Mu1-associated allele of d3
9.03
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: September 1st, 2003
3 days agogl*-N681A glossyN681A: like gl1 but seedling short with narrow stiff leaves
5.00 - 5.04
   Incognito, SJP et al. 2020. Euphytica 216:20     Reference: January 14th, 2020
Variation: September 1st, 2003
4 days agorpl13 60S ribosomal protein L13:
6.05
GRMZM2G409407
    Gene Product: January 13th, 2020
Gene Model: January 11th, 2020
4 days agomta1 mouse transplantation antigen homolog1: endosperm cDNA 5C03G09, similar to rodent ribosomal proteinendosperm cDNA 5C04D09 (uaz208) single copy, similar to Arabidopsis homolog of a mouse transplantation antigen
1.10
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: January 13th, 2020
Variation: January 26th, 2011
4 days agomta2 mouse transplantation antigen homolog2: endosperm cDNA probe 5C03G09, similar to rodent ribosomal protein
 
GRMZM2G072315
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: January 13th, 2020
Gene Model: January 12th, 2020
4 days agoIDP659  :
6.04
GRMZM2G331316
    Variation: March 31st, 2005
Gene Model: January 13th, 2020
5 days agotubg2 gamma-tubulin2: full-length cDNA; deduced amino acid sequence shows high similarity to this tubulin of Arabidopsis and others
6.05
GRMZM2G085970
    Gene Product: January 12th, 2020
Variation: July 22nd, 2015
Gene Model: May 8th, 2015
5 days agotubg1 gamma-tubulin1:
 
GRMZM2G073888
Lopez, I; Khan, S; Sevik, M; Cande, WZ; Hussey, PJ. 1995. Plant Physiol 107:309-310     Reference: September 1st, 2003
Gene Product: January 12th, 2020
Variation: July 22nd, 2015
Gene Model: July 22nd, 2015
5 days agotubg3 gamma-tubulin 3:
 
GRMZM2G008093
    Gene Product: January 12th, 2020
Gene Model: January 11th, 2020
5 days agorpl23a 60S ribosomal protein L23a:
 
GRMZM2G166659
    Gene Product: September 1st, 2003
Gene Model: January 12th, 2020
5 days agoAI665898  :
6.05
GRMZM2G142409
    Variation: March 31st, 2005
Gene Model: January 12th, 2020
6 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Gene Product: July 5th, 2019
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
6 days agowri2 WRI1 transcription factor2:
4.08
GRMZM2G174834
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: April 11th, 2011
Gene Model: April 7th, 2011
6 days agohscf1 heat shock complementing factor1: cDNA with 2 APETALA2-like binding domains
9.03
GRMZM2G139082
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: December 22nd, 2012
Gene Model: July 28th, 2016
6 days agoereb197 AP2-EREBP-transcription factor 197: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G174784
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: September 1st, 2003
Gene Model: February 17th, 2018
6 days agoereb117 AP2-EREBP-transcription factor 117: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM2G113078
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: September 1st, 2003
Gene Model: September 20th, 2018
6 days agoereb24 AP2-EREBP-transcription factor 24: similar to Arabidopsis AP2-like ethylene-responsive transcription factorLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G086573
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: September 1st, 2003
Gene Model: February 21st, 2018
6 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Du, XM et al. 2019. Frontiers Plant Sci 10:1633   LOC_Os1g67410 (MSU/TIGR) Reference: January 11th, 2020
Gene Product: July 5th, 2019
6 days agowri1 WRI1 transcription factor1:
 
GRMZM2G124524
Du, XM et al. 2019. Frontiers Plant Sci 10:1633     Reference: January 11th, 2020
Variation: April 11th, 2011
Gene Model: April 8th, 2011
6 days agodtc1 dicarboxylate/tricarboxylate transporter1:
 
GRMZM2G042146
    Gene Product: January 11th, 2020
Gene Model: January 11th, 2020
6 days agoIDP1959  :
6.05
GRMZM2G558539
    Variation: March 31st, 2005
Gene Model: January 11th, 2020
6 days agodtc2 dicarboxylate/tricarboxylate transporter2:
6.05
GRMZM2G051630
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: January 11th, 2020
Gene Model: November 22nd, 2019
7 days agomha2 plasma-membrane H+ATPase2: cDNA sequence similar to plant plasma-membrane [H+]-ATPase and distinct from mha1
2.02
   Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
7 days agobsd2 bundle sheath defective2: bundle sheath chloroplasts disrupted; high chlorophyll fluorescence, seedling lethal
1.05
   Li, HY et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-019-2219-7     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2009
7 days agomha13 membrane H(+)-ATPase13:
1.09
   Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
7 days agoarftf16 ARF-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: January 10th, 2020
7 days agomha4 proton-exporting ATPase4:
10.07
GRMZM2G006894
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: December 14th, 2017
Gene Model: December 14th, 2017
7 days agomha1 membrane H(+)-ATPase1: cDNA and genomic sequences similar to plant plasma membrane proton-translocating ATPase, major band in Southerns; partly contained in Bs-1 retroelement; SSR umc1207
2.09
GRMZM2G144821
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: February 20th, 2007
Gene Model: January 22nd, 2016
7 days agomha3 membrane H(+)-ATPase3:
 
GRMZM2G104325
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Variation: January 22nd, 2016
Gene Model: January 22nd, 2016
7 days agonsa1 Na+ content under saline-alkaline conditions1: involved in Na+ homeostasis; mutants promote root Na+ efflux
 
GRMZM2G000397
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: January 10th, 2020
Variation: January 10th, 2020
Gene Model: January 10th, 2020
7 days agomha5 membrane H(+)-ATPase5:
 
GRMZM2G341058
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha6 membrane H(+)-ATPase6:
 
GRMZM2G008122
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha7 membrane H(+)-ATPase7:
 
GRMZM2G148374
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha8 membrane H(+)-ATPase8:
 
GRMZM2G455557
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha10 membrane H(+)-ATPase10:
 
GRMZM2G131309
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha11 membrane H(+)-ATPase11:
 
GRMZM2G172183
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha12 membrane H(+)-ATPase12:
 
GRMZM2G035520
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
7 days agomha9 membrane H(+)-ATPase9:
 
AC209050.3_FG001
Cao, YB et al. 2020. Nature communications 11:186     Reference: January 10th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
8 days agoznf7 zinc finger protein7:
 
GRMZM2G302912
    Gene Product: January 9th, 2020
Gene Model: January 8th, 2020
8 days agoznf8 zinc finger protein8:
6.05
GRMZM2G061980
    Gene Product: January 9th, 2020
Gene Model: January 8th, 2020
8 days agogrx2 glutaredoxin 2:
6.05
GRMZM2G318213
    Variation: March 31st, 2005
Gene Model: January 9th, 2020
8 days agoIDP86  :
6.05
GRMZM5G874277
    Variation: March 31st, 2005
Gene Model: January 9th, 2020
9 days agorps21b 40S ribosomal protein S21b:
 
GRMZM2G134109
Dresselhaus, T et al. 1999. Mol Gen Genet 261:416-427     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 14th, 2008
Gene Model: January 8th, 2020
9 days agopfk3 phosphofructokinase3:
 
GRMZM2G401970
    Gene Product: January 8th, 2020
Gene Model: January 8th, 2020
10 days agoras1 ras related protein1: rab2-homologous cDNA
2.04
GRMZM2G330430
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Gene Product: January 7th, 2020
Variation: January 14th, 2011
Gene Model: October 25th, 2013
10 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Li, CS et al. 2020. Nature communications 11:17     Reference: January 7th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2016
10 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CS et al. 2020. Nature communications 11:17     Reference: January 7th, 2020
Gene Product: September 17th, 2010
Variation: December 10th, 2019
10 days agocyp28 cytochrome P-450 28:
 
GRMZM2G132478
    Gene Product: March 25th, 2019
Gene Model: January 7th, 2020
10 days agolic1 lichenase1:
 
GRMZM2G041961
    Gene Product: January 7th, 2020
Gene Model: January 7th, 2020
10 days agolic2 lichenase2:
 
GRMZM2G137535
    Gene Product: January 7th, 2020
Gene Model: January 7th, 2020
10 days agorbp1 ran-binding protein1:
 
AC213884.3_FG001
    Gene Product: January 7th, 2020
Gene Model: January 7th, 2020
10 days agoIDP635  :
6.05
GRMZM2G088669
    Variation: March 31st, 2005
Gene Model: January 7th, 2020
11 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hoerster, GJ et al. 2020. In Vitro Cell Dev Biol-Plant pp.doi: 10.1007/s11627-019-10042-2     Reference: January 6th, 2020
Gene Product: August 25th, 2017
11 days agoosca6 hyperosmolality-gated calcium-permeable channels6: encodes a class II OSCA
3.04
GRMZM2G163059
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: April 3rd, 2018
11 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Hoerster, GJ et al. 2020. In Vitro Cell Dev Biol-Plant pp.doi: 10.1007/s11627-019-10042-2     Reference: January 6th, 2020
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
11 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
Chairez Tejeda, L-H et al. 2020. Biotechnology Research and Innovation doi: 10.1016/j.biori.2019.12.001     Reference: January 6th, 2020
Variation: August 15th, 2017
Gene Model: August 15th, 2017
11 days agoosca1 hyperosmolality-gated calcium-permeable channels1: encodes a class I OSCA
 
GRMZM2G064189
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca2 hyperosmolality-gated calcium-permeable channels2: encodes a class I OSCA
 
GRMZM2G021194
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca4 hyperosmolality-gated calcium-permeable channels4: encodes a class I OSCA
 
GRMZM2G181206
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca5 hyperosmolality-gated calcium-permeable channels5: encodes a class I OSCA
 
GRMZM2G128641
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca7 hyperosmolality-gated calcium-permeable channels7: encodes a class II OSCA
 
GRMZM2G409093
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca8 hyperosmolality-gated calcium-permeable channels8: encodes a class II OSCA
 
GRMZM2G164470
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca9 hyperosmolality-gated calcium-permeable channels9: encodes a class II OSCA
 
GRMZM2G039186
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca10 hyperosmolality-gated calcium-permeable channels10: encodes a class II OSCA
 
GRMZM2G402708
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca11 hyperosmolality-gated calcium-permeable channels11: encodes a class III OSCA
 
GRMZM2G162253
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca12 hyperosmolality-gated calcium-permeable channels12: encodes a class IV OSCA
 
GRMZM2G059891
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoosca3 hyperosmolality-gated calcium-permeable channels3: encodes a class I OSCA
8.03
GRMZM2G456000
Cao, LR et al. 2019. Int J Mol Sci 21:351     Reference: January 6th, 2020
Gene Product: January 6th, 2020
Gene Model: January 6th, 2020
11 days agoAY104589  :
6.05
GRMZM2G479608
    Variation: March 21st, 2007
Gene Model: January 6th, 2020
11 days agoatg8b autophagy8b:
10.06
GRMZM2G419694
Chairez Tejeda, L-H et al. 2020. Biotechnology Research and Innovation doi: 10.1016/j.biori.2019.12.001     Reference: January 6th, 2020
Variation: March 31st, 2005
Gene Model: August 15th, 2017
12 days agoumc1462  :
6.05
GRMZM2G033641
    Variation: September 1st, 2003
Gene Model: January 5th, 2020
12 days agoAY107881  :
6.05
GRMZM5G833124
    Variation: September 25th, 2007
Gene Model: January 5th, 2020
13 days agomads68 MADS-transcription factor 68: Ortholog of rice MADS47; regulates zein gene transcription by interacting with o2 (Qiao et al., 2016)
1.02
GRMZM2G059102
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z   LOC_Os03g08754 (MSU/TIGR) Reference: January 4th, 2020
Variation: April 15th, 2016
Gene Model: April 15th, 2016
13 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
13 days agoo1 opaque endosperm1: endosperm starch soft, opaque
4.08 - 4.08
GRMZM2G449909
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: October 9th, 2017
Gene Model: August 28th, 2012
13 days agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
13 days agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z   AT1G49770 (TAIR) Reference: January 4th, 2020
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
13 days agoo7 opaque endosperm7: like o1; high lysine content
10.07
GRMZM2G074759
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
13 days agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: April 20th, 2005
13 days agoohp1 opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci
1.11
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
13 days agonactf130 NAC-transcription factor 130: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 8th, 2019
13 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z   AT1G43700 (TAIR) Reference: January 4th, 2020
Gene Product: August 21st, 2018
Variation: September 24th, 2018
13 days agoohp2 opaque2 heterodimerizing protein2: cDNA sequence, SSRs nc007, phi024
5.01
   Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: April 25th, 2015
13 days agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
13 days agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
13 days agonrp1 no-apical-meristem-related protein1: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
GRMZM2G062650
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 8th, 2019
Variation: March 31st, 2011
Gene Model: July 28th, 2016
13 days agoks2 kaurene synthase2:
 
GRMZM2G093526
Yang, PP et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11105-019-01190-1     Reference: January 4th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
13 days agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
13 days agoarodh1 arogenate dehydrogenase1: mutants have retarded vegetative growth and opaque endosperm
 
GRMZM2G084942
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: July 7th, 2018
Variation: July 7th, 2018
Gene Model: October 4th, 2017
13 days agoohp3 opaque2 heterodimerizing protein3:
8.05
GRMZM2G143469
Li, CB; Song, RT. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-019-03520-z     Reference: January 4th, 2020
Gene Product: August 21st, 2018
Gene Model: September 24th, 2018
14 days agoumc1474  :
6.05
GRMZM2G100641
    Variation: September 1st, 2003
Gene Model: January 3rd, 2020
15 days agoncp1 nine complex protein1: acts as a negative regulator of ABA signaling by interacting with and inhibiting the activity of transcriptional activator ABP9 (abre1)
 
AC197717.3_FG002
Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
Gene Model: January 2nd, 2020
15 days agoncp2 nine complex protein2: 38% homology with ncp1
 
GRMZM5G831577
Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
Gene Model: January 2nd, 2020
15 days agoncp3 nine complex protein3: 57% homology with ncp1 at C-terminal
 
GRMZM2G053831
Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
Gene Model: January 2nd, 2020
15 days agoabre1 ABA-responsive cis-element binding protein1: encoded protein specifically binds to ABRE2 motifs and activates the expression of downstream reporter genes
 
   Zong, N et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-019-00951-6     Reference: January 2nd, 2020
Gene Product: January 2nd, 2020
16 days agoIDP843  :
6.05
GRMZM2G061105
    Variation: March 31st, 2005
Gene Model: January 1st, 2020
17 days agorpl33 50S ribosomal protein L33:
6.06
GRMZM2G176133
    Variation: March 31st, 2005
Gene Model: December 31st, 2019
18 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Zhang, XG et al. 2019. BMC Plant Biology 19:589     Reference: December 30th, 2019
Gene Product: May 1st, 2012
Variation: December 30th, 2019
Gene Model: April 28th, 2012
18 days agomdh3 malate dehydrogenase3: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
3.08
GRMZM2G466833
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 30th, 2015
18 days agosrs1 SHI/STY (SRS)-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs2 SHI/STY (SRS)-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs3 SHI/STY (SRS)-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs4 SHI/STY (SRS)-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs5 SHI/STY (SRS)-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs6 SHI/STY (SRS)-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to lateral root primordium protein-like protein of A. thaliana
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs7 SHI/STY (SRS)-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agosrs8 SHI/STY (SRS)-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3     Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agolrp1 lateral root primordia1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   He, B et al. 2019. J Genet 99:3   AT5G12330 (TAIR) Reference: December 30th, 2019
Gene Product: April 27th, 2015
18 days agoimd4 isopropylmalate dehydrogenase4:
 
GRMZM2G120857
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Gene Model: July 27th, 2017
18 days agoscoal1 succinyl-CoA ligase1:
 
GRMZM2G064695
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: December 30th, 2019
Gene Model: December 30th, 2019
18 days agokgdh1 alpha-ketoglutarate dehydrogenase:
 
GRMZM2G079538
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Gene Model: December 30th, 2019
18 days agoaco12 aconitase12:
1.01
GRMZM2G176397
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: February 10th, 2019
20 days agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
20 days agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
20 days agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
20 days agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
GRMZM2G142873
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: June 17th, 2011
Variation: August 29th, 2011
Gene Model: September 19th, 2011
20 days agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
20 days agopmei36 pectin methylesterase inhibitor36:
2.09
GRMZM2G066950
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Variation: September 1st, 2003
Gene Model: December 28th, 2019
20 days agopmei40 pectin methylesterase inhibitor40:
9.03
GRMZM2G040311
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei17 pectin methylesterase inhibitor17:
1.11
GRMZM2G458349
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopme36 pectin methylesterase36:
2.03
GRMZM2G162333
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme31 pectin methylesterase31:
3.09
GRMZM2G004927
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agofl4 floury4: semi-dominant opaque mutant that produces small, misshapen, and aggregated protein bodies; encodes member of 19kD α-zein z1A-1 subfamily
 
GRMZM2G353272
Khan, NU et al. 2019. Food Production, Processing and Nutrition 1:13     Reference: December 28th, 2019
Gene Product: April 9th, 2014
Variation: April 8th, 2014
Gene Model: April 9th, 2014
20 days agopme44 pectin methylesterase44:
 
GRMZM2G043415
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme7 pectin methylesterase7:
 
GRMZM2G314663
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme18 pectin methylesterase18:
 
GRMZM2G062996
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme6 pectin methylesterase6:
 
GRMZM2G012328
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme8 pectin methylesterase8:
 
GRMZM2G128549
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme9 pectin methylesterase9:
 
GRMZM2G352359
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme10 pectin methylesterase10:
 
GRMZM2G321870
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme11 pectin methylesterase11:
 
GRMZM2G112984
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme12 pectin methylesterase12:
 
GRMZM2G158240
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme13 pectin methylesterase13:
 
GRMZM2G008593
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme14 pectin methylesterase14:
 
GRMZM2G017555
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme15 pectin methylesterase15:
 
GRMZM2G175499
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme16 pectin methylesterase16:
 
GRMZM2G119864
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme17 pectin methylesterase17:
 
GRMZM2G128682
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme19 pectin methylesterase19:
 
GRMZM2G136106
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme20 pectin methylesterase20:
 
GRMZM2G025182
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme21 pectin methylesterase21:
 
AC212451.4_FG009
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme22 pectin methylesterase22:
 
GRMZM2G167637
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme23 pectin methylesterase23:
 
GRMZM2G442593
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme24 pectin methylesterase24:
 
GRMZM2G404767
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme25 pectin methylesterase25:
 
GRMZM2G393762
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme26 pectin methylesterase26:
 
GRMZM2G019411
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme27 pectin methylesterase27:
 
GRMZM2G123018
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme28 pectin methylesterase28:
 
GRMZM2G178916
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme29 pectin methylesterase29:
 
GRMZM2G440016
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme30 pectin methylesterase30:
 
GRMZM2G121278
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme32 pectin methylesterase32:
 
GRMZM2G318299
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme33 pectin methylesterase33:
 
GRMZM2G070913
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme34 pectin methylesterase34:
 
GRMZM2G422631
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme35 pectin methylesterase35:
 
GRMZM2G455564
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme37 pectin methylesterase37:
 
GRMZM2G043943
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme38 pectin methylesterase38:
 
GRMZM2G071339
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme39 pectin methylesterase39:
 
GRMZM2G120779
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme40 pectin methylesterase40:
 
GRMZM2G177940
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme41 pectin methylesterase41:
 
GRMZM2G037411
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopme42 pectin methylesterase42:
 
GRMZM2G382557
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
20 days agopmei13 pectin methylesterase inhibitor13:
 
GRMZM2G482245
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei21 pectin methylesterase inhibitor21:
 
GRMZM2G458200
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei7 pectin methylesterase inhibitor7:
 
GRMZM2G451028
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei8 pectin methylesterase inhibitor8:
 
GRMZM2G439908
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei9 pectin methylesterase inhibitor9:
 
GRMZM2G380284
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei10 pectin methylesterase inhibitor10:
 
GRMZM2G369432
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei12 pectin methylesterase inhibitor12:
 
GRMZM2G362828
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei14 pectin methylesterase inhibitor14:
 
GRMZM2G339129
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei16 pectin methylesterase inhibitor16:
 
GRMZM2G309944
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei11 pectin methylesterase inhibitor11:
 
GRMZM5G891247
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei18 pectin methylesterase inhibitor18:
 
GRMZM2G174263
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei20 pectin methylesterase inhibitor20:
 
GRMZM2G164929
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei22 pectin methylesterase inhibitor22:
 
GRMZM2G157873
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei23 pectin methylesterase inhibitor23:
 
GRMZM2G157825
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei24 pectin methylesterase inhibitor24:
 
GRMZM2G152141
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei25 pectin methylesterase inhibitor25:
 
GRMZM2G138999
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei26 pectin methylesterase inhibitor26:
 
GRMZM2G133146
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei27 pectin methylesterase inhibitor27:
 
GRMZM2G129092
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei29 pectin methylesterase inhibitor29:
 
GRMZM2G116140
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei30 pectin methylesterase inhibitor30:
 
GRMZM2G101945
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei33 pectin methylesterase inhibitor33:
 
GRMZM2G078886
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei34 pectin methylesterase inhibitor34:
 
GRMZM2G078804
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei35 pectin methylesterase inhibitor35:
 
GRMZM2G067710
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei37 pectin methylesterase inhibitor37:
 
GRMZM2G057220
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei39 pectin methylesterase inhibitor39:
 
GRMZM2G046111
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei41 pectin methylesterase inhibitor41:
 
GRMZM2G035490
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei42 pectin methylesterase inhibitor42:
 
GRMZM2G034846
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei43 pectin methylesterase inhibitor43:
 
GRMZM2G008047
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei44 pectin methylesterase inhibitor44:
 
GRMZM2G003838
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei45 pectin methylesterase inhibitor45:
 
AC233850.1_FG003
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei46 pectin methylesterase inhibitor46:
 
AC233850.1_FG002
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei47 pectin methylesterase inhibitor47:
 
AC213432.2_FG004
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei48 pectin methylesterase inhibitor48:
 
AC212023.4_FG004
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei49 pectin methylesterase inhibitor49:
 
AC186577.3_FG006
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei38 pectin methylesterase inhibitor38:
6.01
GRMZM2G048430
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopmei15 pectin methylesterase inhibitor15:
8.01
GRMZM2G323558
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: December 28th, 2019
20 days agopme43 pectin methylesterase43:
4.00
GRMZM2G431856
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Variation: March 31st, 2005
Gene Model: December 28th, 2019
21 days agocsu928  :
6.07
GRMZM2G154648
    Variation: March 21st, 2007
Gene Model: December 27th, 2019
21 days agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
21 days agopmei19 pectin methylesterase inhibitor19:
4.11
GRMZM2G167149
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Variation: June 7th, 2018
Gene Model: June 8th, 2018
21 days agopmei3 pectin methylesterase inhibitor3:
6.05
   Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Variation: September 25th, 2007
21 days agopme4 pectin methylesterase4:
 
GRMZM2G060400
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: June 4th, 2012
21 days agopme5 pectin methylesterase5: similar to pectinesterase 45 of A. thaliana
 
GRMZM2G137676
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: June 4th, 2012
21 days agopme2 pectin methylesterase2:
 
GRMZM2G046618
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: September 10th, 2018
Gene Model: April 26th, 2014
21 days agopmei2 pectin methylesterase inhibitor2:
 
GRMZM2G122230
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
21 days agopmei4 pectin methylesterase inhibitor4:
 
GRMZM2G457612
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
21 days agopmei6 pectin methylesterase inhibitor6:
 
GRMZM2G343236
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
21 days agoinvinh1 invertase inhibitor1: Interacts with incw5 (Zhao et al., 2019)
 
GRMZM2G162447
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 7th, 2019
21 days agoinvinh2 invertase inhibitor2:
 
GRMZM2G300141
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
21 days agoinvinh3 invertase inhibitor3:
 
GRMZM2G096897
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
21 days agoinvinh4 invertase inhibitor4: inhibits both cell wall and vacuolar invertase activities from maize leaves
 
GRMZM2G368698
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
21 days agopmei1 pectin methylesterase inhibitor1:
6.07
GRMZM2G079661
Zhang, PP et al. 2019. Sci. Rep. 9:19918     Reference: December 27th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
22 days agorps12a ribosomal proteinS12 (homolog):
6.07
GRMZM2G132929
    Gene Product: September 1st, 2003
Gene Model: December 26th, 2019
24 days agosig1A sigma factor 1A:
10.03
GRMZM2G006736
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Variation: October 14th, 2015
Gene Model: May 8th, 2015
Recommended by Marty Sachs:
March 7th, 2007
24 days agosig1B sigma factor 1B: sig5 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.05
GRMZM2G543629
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Gene Model: May 8th, 2015
Recommended by Marty Sachs:
March 7th, 2007
24 days agosig6 sigma-like factor6:
5.00
GRMZM2G144196
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Variation: June 24th, 2015
Gene Model: May 8th, 2015
Recommended by Ed Coe:
January 25th, 2007
24 days agosig2B sigma-like factor2B:
1.03
GRMZM2G100086
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Gene Model: April 11th, 2013
Recommended by Ed Coe:
January 25th, 2007
24 days agosig2 Sigma70-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
24 days agosig3 Sigma70-like-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
24 days agosig7 Sigma70-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
24 days agosig8 Sigma70-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
24 days agosig2A sigma factor sig2A:
4.03
GRMZM2G143392
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
Variation: May 21st, 2005
Gene Model: May 8th, 2015
25 days agondk1 nucleotide diphosphate kinase1: leaf cDNA csu269, single copy
7.03
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: December 23rd, 2019
Variation: September 9th, 2014
Recommended by Ed Coe:
January 8th, 2008
25 days agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
25 days agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Variation: September 1st, 2003
Gene Model: July 6th, 2017
25 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: October 24th, 2007
Variation: February 1st, 2015
25 days agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: December 23rd, 2019
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
25 days agophyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: October 24th, 2007
Variation: January 11th, 2013
25 days agondpk1 nucleoside diphosphate kinase1: encodes a G4-binding protein
 
GRMZM2G178576
Kopylov, M et al. 2015. Biochemistry pp.DOI: 10.1021/bi501284g     Reference: February 14th, 2015
Gene Product: December 23rd, 2019
Variation: February 14th, 2015
Gene Model: February 14th, 2015
25 days agondpk4 nucleoside diphosphate kinase 4:
 
GRMZM5G833747
    Gene Product: December 23rd, 2019
Gene Model: December 23rd, 2019
25 days agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
25 days agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: June 30th, 2009
Variation: June 30th, 2009
25 days agophyC2 phytochromeC2: red/far red light signal receptor; minor phytochrome C transcript in seedling leaf blade, sheath, mesocotyl. See also phyC1, phyA1, phyA2 phyB1, phyB2.
5.01
   Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: June 30th, 2009
Variation: June 30th, 2009
27 days agompkl1 MAP kinase-like1: encodes a functional kinase that mediates the response of maize seedlings to drought by regulating ABA homeostasis
 
GRMZM2G108829
Zhu, D et al. 2019. Plant J pp.doi: 10.1111/tpj.14660     Reference: December 21st, 2019
Gene Product: May 13th, 2014
Variation: December 21st, 2019
Gene Model: December 21st, 2019
27 days agompkl2 MAP kinase-like2:
 
GRMZM2G178822
Zhu, D et al. 2019. Plant J pp.doi: 10.1111/tpj.14660     Reference: December 21st, 2019
Gene Product: May 13th, 2014
Gene Model: December 21st, 2019
27 days agompkl4 MAP kinase-like4:
 
GRMZM2G045241
Zhu, D et al. 2019. Plant J pp.doi: 10.1111/tpj.14660     Reference: December 21st, 2019
Gene Product: May 13th, 2014
Gene Model: December 21st, 2019
27 days agonudix22 nudix type motif 22:
 
GRMZM5G886561
    Gene Product: June 18th, 2014
Gene Model: December 21st, 2019
28 days agoehd1 eps15 homology domain protein1: mutants showed defects in kernel development and vegetative growth
4.10
GRMZM2G052740
Wang, YF et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01336     Reference: December 20th, 2019
Gene Product: December 20th, 2019
Variation: December 20th, 2019
Gene Model: August 15th, 2018
29 days agocsu204(uce)  :
8.04
GRMZM2G007276
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: December 19th, 2019
Gene Model: August 30th, 2019
29 days agouce3 ubiquitin conjugating enzyme3:
1.01
GRMZM2G070047
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Variation: February 15th, 2015
Gene Model: February 16th, 2015
29 days agocsu456(uce)  :
3.08
GRMZM5G814314
    Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
29 days agocsu591(uce)  :
8.08
GRMZM5G866947
    Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
29 days agouce17 ubiquitin conjugating enzyme17: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
9.04
GRMZM2G163398
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
29 days agouce8 ubiquitin conjugating enzyme8:
5.03
GRMZM2G146374
    Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
29 days agouce13 ubiquitin conjugating enzyme13:
 
GRMZM2G085600
de Vries, A et al. 1998. Plant Physiol 118:1101   AT5G59300 (TAIR) Reference: September 1st, 2003
Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
29 days agocdpk27 calcium dependent protein kinase27:
8.08
GRMZM2G311220
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: January 10th, 2018
29 days agocdpk7 calcium dependent protein kinase7: unpublished root cDNA sequence
4.06
GRMZM2G081310
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: March 31st, 2015
29 days agouce5 ubiquitin conjugating enzyme5:
1.10
GRMZM2G022859
Winkler, RG and Helentjaris, T. 1993. MNL 67:110-111     Reference: September 1st, 2003
Gene Product: December 19th, 2019
Variation: September 16th, 2016
Gene Model: September 16th, 2016
29 days agouce1 ubiquitin conjugating enzyme1: endosperm cDNA 2C06C11 (uaz102), similar to plant ubiquitin conjugating enzymes
1.08
GRMZM2G007381
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
29 days agogbp2 GTP binding protein2: cDNA sequence similar animal G protein beta-subunits; single copy
1.09
GRMZM2G045314
Wu, QY et al. 2019. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1917577116     Reference: December 19th, 2019
Gene Product: May 1st, 2018
Variation: December 19th, 2019
Gene Model: July 27th, 2016
29 days agouce4 ubiquitin conjugating enzyme4:
2.01
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 19th, 2019
Variation: July 29th, 2004
29 days agocdpk34 calcium dependent protein kinase34:
1.11
GRMZM2G104125
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 19th, 2019
29 days agouce2 ubiquitin conjugating enzyme2:
9.01
GRMZM2G177276
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: December 19th, 2019
Gene Model: April 26th, 2014
29 days agorboh3 respiratory burst oxidase3:
 
GRMZM2G043435
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
29 days agouce6 ubiquitin conjugating enzyme6:
 
GRMZM2G018447
    Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
29 days agouce7 ubiquitin conjugating enzyme7:
 
GRMZM2G053764
    Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
29 days agocdpk17 calcium dependent protein kinase17:
 
GRMZM2G025387
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
29 days agocdpk18 calcium dependent protein kinase18:
 
GRMZM2G027351
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
29 days agouce9 ubiquitin conjugating enzyme9:
 
GRMZM2G027378
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: December 19th, 2019
Gene Model: May 10th, 2018
29 days agocdpk29 calcium dependent protein kinase29: pollen-specific expression; involved in the regulation of pollen germination and tube extension
 
GRMZM2G332660
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: May 30th, 2018
29 days agouce10 ubiquitin conjugating enzyme10:
 
GRMZM2G381709
Du, QG et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00034   AT2G33770 (TAIR) Reference: July 2nd, 2018
Gene Product: December 19th, 2019
Gene Model: July 2nd, 2018
29 days agouce11 ubiquitin conjugating enzyme11:
 
GRMZM2G464572
Du, QG et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00034   AT2G33770 (TAIR) Reference: July 2nd, 2018
Gene Product: December 19th, 2019
Gene Model: July 2nd, 2018
29 days agouce14 ubiquitin conjugating enzyme14:
 
GRMZM2G074479
    Gene Product: December 19th, 2019
Gene Model: November 26th, 2019
29 days agocal4 calmodulin4:
 
GRMZM2G115628
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: September 1st, 2003
Gene Model: December 19th, 2019
29 days agocal5 calmodulin5:
 
GRMZM2G155822
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: September 1st, 2003
Gene Model: December 19th, 2019
29 days agocal6 calmodulin6:
 
GRMZM2G142693
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: September 1st, 2003
Gene Model: December 19th, 2019
29 days agouce15 ubiquitin-conjugating enzyme15: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G063931
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
29 days agouce16 ubiquitin-conjugating enzyme16: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G312693
Wang, HY et al. 2019. Int J Mol Sci 21:29     Reference: December 19th, 2019
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
29 days agouce18 ubiquitin-conjugating enzyme18: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G038851
Augustine, RC et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00353     Reference: May 23rd, 2016
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
29 days agouce19 ubiquitin-conjugating enzyme19: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G341089
Augustine, RC et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00353     Reference: May 23rd, 2016
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
29 days agouce20 ubiquitin-conjugating enzyme20: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G433968
Augustine, RC et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00353     Reference: May 23rd, 2016
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
29 days agouce12 ubiquitin conjugating enzyme12:
8.03
GRMZM2G015287
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Gene Product: December 19th, 2019
Variation: March 31st, 2005
Gene Model: July 25th, 2018
29 days agocdpk10 calcium-dependent protein kinase 10:
 
GRMZM2G320506
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Variation: February 13th, 2008
Gene Model: March 31st, 2015
29 days agocdpk32 calcium dependent protein kinase32:
2.08
GRMZM2G099425
Parish, F et al. 2019. Front Microbiol 10:2683     Reference: December 19th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 13th, 2019
31 days agomips1 myo-inositol phosphate synthase1: encodes myo-inositol phosphate synthase; may be involved in kernel phytic acid levels
1.02
GRMZM2G155242
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: July 13th, 2019
Variation: April 30th, 2011
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
31 days agoiaglu1 indol-3-ylacetyl glucosyl transferase1: single or low copy cDNA sequence matches N-terminal polypeptide sequence of purified maize indol-3-ylacetyl glucosyl transferase and, in transformed E. coli, produces a catalytically active protein
1.09
GRMZM2G024131
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
31 days agoipp1 inositol-x-phosphate phosphatase1: Involved in the Indole-3-acetic acid (IAA) conjugation pathway
 
GRMZM2G029731
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: December 17th, 2019
Gene Model: December 17th, 2019
31 days agoIDP1627  :
6.01
GRMZM2G112238
    Variation: March 31st, 2005
Gene Model: December 17th, 2019
31 days agoiain1 IAA-inositol1: Involved in the Indole-3-acetic acid (IAA) conjugation pathway
5.04
GRMZM2G386155
Ostrowski, M et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.153082     Reference: December 17th, 2019
Gene Product: December 17th, 2019
Gene Model: December 17th, 2019
32 days agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
32 days agolimtf12 LIM-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf13 LIM-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf14 LIM-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to GATA type zinc finger transcription factor family protein of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf2 LIM-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to DA1-related protein 2 of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf3 LIM-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf5 LIM-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf6 LIM-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf7 LIM-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf8 LIM-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to GATA type zinc finger transcription factor family protein of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agolimtf9 LIM-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
32 days agovp10 viviparous10: yellow endosperm, colored aleurone, green seedlings, adherent
10.07
   Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: February 22nd, 2007
Variation: June 23rd, 2012
32 days agoopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
32 days agoopr8 12-oxo-phytodienoic acid reductase8: peroxisomal; synthesis of jasmonic acid
4.05
GRMZM2G082087
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
32 days agoraf1 Rubisco Assembly Factor 1: Rubisco Accumulation Factor1; promotes Rubisco assembly. (A. Barkan, 2015)Encodes a previously unstudied protein that is conserved in the green lineage and localizes to bundle sheath chloroplasts
 
GRMZM2G457621
Salesse-Smith, CE et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13306     Reference: December 16th, 2019
Gene Product: October 4th, 2014
Variation: October 4th, 2014
Gene Model: October 4th, 2014
32 days agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
GRMZM2G417954
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
32 days agolimtf1 LIM-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G128206
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
Variation: March 31st, 2005
Gene Model: February 12th, 2019
32 days agoIDP1988  :
6.01
GRMZM2G050705
    Variation: March 31st, 2005
Gene Model: December 16th, 2019
32 days agolimtf10 LIM-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.01
GRMZM2G004959
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 16th, 2019
Gene Model: December 16th, 2019
32 days agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Ahmad, RM et al. 2019. Int J Mol Sci 20:E6202     Reference: December 16th, 2019
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
32 days agolimtf4 LIM-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.05
GRMZM2G099328
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763   AT4G36860 (TAIR) Reference: May 31st, 2017
Gene Product: December 16th, 2019
Variation: May 31st, 2017
Gene Model: May 31st, 2017
34 days agoals2 acetolactate synthase2: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kineticsSecond band mapped to this site. Acetolactate pyruvate-lyase from tobacco used as the dup(als2) probe
5.04
GRMZM2G143008
Li, YM et al. 2019. Crop J .doi: 10.1016/j.cj.2019.10.001     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 18th, 2013
Gene Model: July 27th, 2016
34 days agoals1 acetolactate synthase1: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kinetics
4.05
   Li, YM et al. 2019. Crop J .doi: 10.1016/j.cj.2019.10.001     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 18th, 2013
34 days agoeno1 enolase1: cDNA clone pZm245 complements enolase mutant in E. coli; leaf cDNA csu158 probes same site
9.02
   Ma, LL et al. 2019. Crop J doi: 10.1016/j.cj.2019.11.004     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 25th, 2007
34 days agocsu70  : partially sequenced leaf cDNA; single map site
6.01
GRMZM2G080546
Simcox, KD; McMullen, MD; Louie, R. 1995. Theor Appl Genet 90:341-346     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 14th, 2019
34 days agoost1 oligosaccharide transferase1: vegetative meristem cDNA 7C02F04 similar to an integral endoplasmic reticulum protein
7.02
GRMZM2G462325
Ma, LL et al. 2019. Crop J doi: 10.1016/j.cj.2019.11.004     Reference: December 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
35 days agocdpk3 calcium dependent protein kinase3: full-length cDNA, kinase function confirmed by direct assay of enzyme raised in E. coli (Saijo 1997)
2.07
GRMZM2G168706
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: December 3rd, 2013
35 days agocdpk6 calcium dependent protein kinase6:
4.09
GRMZM2G035843
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: December 19th, 2017
35 days agocdpk8 calcium dependent protein kinase8:
7.03
GRMZM2G154489
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Variation: July 22nd, 2015
Gene Model: March 31st, 2015
35 days agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2019. G3 pp.doi: 10.1534/g3.119.400838     Reference: December 13th, 2019
Gene Product: June 8th, 2007
Variation: March 17th, 2011
35 days agompk1 MAP kinase1: cDNA sequence; single copy
9.06
GRMZM2G053987
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 16th, 2013
Gene Model: July 9th, 2013
35 days agompk2 MAP kinase2: functions in brassinosteroid signaling in antioxidant defense (Zhang et al 2010) cDNA sequence; single copy (Berberich et al 1999)
9.02
GRMZM2G020216
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
35 days agosimk1 salt-induced MAP kinase1:
 
GRMZM2G127141
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: July 12th, 2013
35 days agocdpk33 calcium dependent protein kinase33:
2.06
GRMZM2G365035
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 13th, 2019
35 days agompk7 MAP kinase7:
 
GRMZM2G002100
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
35 days agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
35 days agosnrkII1 SnRK2 serine threonine protein kinase1:
 
GRMZM2G035809
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
35 days agoprh3 protein phosphatase homolog3:
 
GRMZM2G059453
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
35 days agoprh8 protein phosphatase homolog8:
 
GRMZM2G122228
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
35 days agoprh10 protein phosphatase homolog10:
 
GRMZM2G019819
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
35 days agoprh14 protein phosphatase homolog14:
 
GRMZM2G102255
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
35 days agoprh15 protein phosphatase homolog15:
 
GRMZM2G383807
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
35 days agompk17 MAP kinase17:
 
GRMZM2G374088
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: October 2nd, 2017
35 days agocdpk19 calcium dependent protein kinase19:
 
GRMZM2G028086
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
35 days agocdpk23 calcium dependent protein kinase23:
 
GRMZM2G058305
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
35 days agoprh18 protein phosphatase homolog18:
 
GRMZM2G437575
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
35 days agoprh19 protein phosphatase homolog19:
 
GRMZM2G001243
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
35 days agocdpk31 calcium dependent protein kinase31:
 
GRMZM2G463464
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: December 3rd, 2013
Gene Model: December 13th, 2019
35 days agompk4 MAP kinase4:
 
GRMZM2G123886
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk11 MAP kinase11:
 
GRMZM2G375975
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk13 MAP kinase13:
 
GRMZM2G163861
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk8 MAP kinase8:
 
GRMZM2G131334
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk16 MAP kinase16:
 
GRMZM2G034052
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk18 MAP kinase18:
 
GRMZM2G122335
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk19 MAP kinase19:
 
GRMZM2G007848
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk14 MAP kinase14:
5.03
GRMZM2G062914
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: July 12th, 2013
35 days agompk5 MAP kinase5:
5.03
GRMZM2G048455
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk12 MAP kinase12:
6.07
GRMZM2G062761
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agoprh12 protein phosphatase homolog12:
6.07
   Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: September 1st, 2003
Variation: October 18th, 2016
35 days agosnrkII11 SnRK2 serine threonine protein kinase 11:
6.05
GRMZM2G063961
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
35 days agosnrkII2 SnRK2 serine threonine protein kinase2: induced by cold, salt and ABA
7.04
GRMZM2G056732
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
35 days agompk6 MAP kinase6:
10.03
GRMZM2G089484
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Variation: January 19th, 2013
Gene Model: July 9th, 2013
35 days agosnrkII5 SnRK2 serine threonine kinase5:
10.07
GRMZM2G110908
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
35 days agosnrkII7 SnRK2 serine threonine protein kinase7:
2.04
GRMZM2G155593
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
35 days agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
35 days agompk15 MAP kinase15:
6.01
GRMZM2G306028
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
35 days agompk9 MAP kinase9:
5.03
GRMZM2G135904
Bin Khalid, MH et al. 2019. Int J Mol Sci 20:E6173     Reference: December 13th, 2019
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
38 days agohak1 potassium high-affinity transporter1:
2.04
GRMZM2G093826
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: December 15th, 2018
Gene Model: February 23rd, 2018
38 days agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Liu, HJ et al. 2019. Comm Biol 2:460     Reference: December 10th, 2019
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
38 days agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
38 days agonc2 Na+ content2:
 
GRMZM2G135674
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
38 days agosksc1 silk scar color1:
 
   Stinard, PS. 2017. MNL 91     Reference: March 21st, 2018
Variation: December 10th, 2019
38 days agocopt1 copper transporter1:
 
GRMZM2G003179
Liu, HJ et al. 2019. Comm Biol 2:460     Reference: December 10th, 2019
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
38 days agohak5 potassium high-affinity transporter5: mutants exhibit reduced K uptake and inhibited seedling growth
 
GRMZM2G084779
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: December 15th, 2018
Variation: December 15th, 2018
Gene Model: December 15th, 2018
38 days agosmc2 structural maintenance of chromosomes2: essential for proper chromosome segregation and for H3 phosphorylation at Serine 10 (H3S10ph) at pericentromeres during mitotic division.
 
GRMZM2G006452
Wang, HF et al. 2019. Plant J pp.doi: 10.1111/tpj.14639   AT3G47460 (TAIR) Reference: December 10th, 2019
Gene Product: December 10th, 2019
Gene Model: December 10th, 2019
38 days agohak4 high-affinity potassium transporter4: encodes a Na+-selective transporter
 
GRMZM2G425999
Zhang, M et al. 2019. Nature Plants 5:1297-1308     Reference: December 10th, 2019
Gene Product: December 15th, 2018
Gene Model: December 10th, 2019
38 days agosmc4 structural maintenance of chromosomes4: essential for proper chromosome segregation and for H3 phosphorylation at Serine 10 (H3S10ph) at pericentromeres during mitotic division.
6.06
GRMZM2G383623
Wang, HF et al. 2019. Plant J pp.doi: 10.1111/tpj.14639   AT5G48600 (TAIR) Reference: December 10th, 2019
Gene Product: December 10th, 2019
Gene Model: December 10th, 2019
39 days agobap2 basal layer antifungal protein2: cDNA, multiple copies; antifungal activity; basal endosperm cell specific
4.05
   Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2     Reference: December 9th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
39 days agotcrr1 transfer cell response regulator1: basal endosperm transfer cell specific transcript; encoded protein is found other cells, the conducting cells above the transfer layer, and immature cells adjacent to the transfer layer
4.05
GRMZM2G016145
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2     Reference: December 9th, 2019
Variation: December 31st, 2015
Gene Model: December 31st, 2015
39 days agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
GRMZM2G137954
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2   LOC_Os02g19820 (MSU/TIGR) Reference: December 9th, 2019
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
39 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2     Reference: December 9th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
39 days agodek36 defective kernel36: mutant kernels have a small and collapsed appearance at maturity, with a drastic size reduction in both embryo and endosperm; encodes an E+ subgroup PPR protein
 
GRMZM5G892151
Zhang, XX et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01631-2   At4g21300 (TAIR) Reference: December 9th, 2019
Gene Product: December 27th, 2016
Variation: March 13th, 2017
Gene Model: March 13th, 2017
41 days agomlks2 Maize LINC KASH AtSINE-like2: required for normal male meiosis and pollen development and normal stomatal complex development
 
GRMZM2G000608
Gumber, HK, et al. 2019. Nucleus. 10:144-166     Reference: June 27th, 2019
Gene Product: December 7th, 2019
Variation: June 22nd, 2019
Gene Model: June 7th, 2018
41 days agoarm4 armadillo domain protein4: Mutant kernels are smaller and less plump; encodes an armadillo domain protein
4.10
GRMZM2G019284
Kong, MS et al. 2019. Plant Breed pp.doi: 10.1111/pbr.12786   At1G32260 (TAIR) Reference: December 7th, 2019
Gene Product: December 7th, 2019
Variation: December 7th, 2019
Gene Model: December 7th, 2019
42 days agocchh1 Cys2His2 Zinc Finger1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh35 Cys2His2 Zinc Finger35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.02
GRMZM2G068710
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
42 days agozfp30 putative zinc finger protein30:
4.09
GRMZM2G116079
    Gene Product: December 6th, 2019
Variation: May 19th, 2015
Gene Model: May 19th, 2015
42 days agocchh133 Cys2His2 Zinc Finger133: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh2 Cys2His2 Zinc Finger2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh25 Cys2His2 Zinc Finger25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh26 Cys2His2 Zinc Finger26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh4 Cys2His2 Zinc Finger4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh46 Cys2His2 Zinc Finger46: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agocchh5 Cys2His2 Zinc Finger5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
42 days agoznf2 Zinc finger nuclease2: located between sh1 and bz1 (Hawkins et al., 2014)
9.01
GRMZM2G478553
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: December 6th, 2019
Variation: September 25th, 2015
Gene Model: September 25th, 2015
42 days agoocl4 outer cell layer4:
1.05 - 1.06
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: December 6th, 2019
42 days agorzfl1 RING zinc finger protein-like1:
9.06
   Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: December 6th, 2019
Variation: September 25th, 2007
42 days agotsh1 tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles.
6.07
   Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400     Reference: February 3rd, 2017
Gene Product: December 6th, 2019
Variation: October 6th, 2011
42 days agorhcp1 ring hc protein1: expressed during brace root initiation and regulated by abiotic stresses.
 
GRMZM2G024690
Li, W-L et al. 2017. J Integrative Agric 16: 60345-60347     Reference: April 3rd, 2017
Gene Product: December 6th, 2019
Variation: April 3rd, 2017
Gene Model: April 3rd, 2017
42 days agoznfn1 zinc finger protein1:
 
GRMZM2G086277
  At5g52010 (TAIR)
LOC_Os06g07020 (MSU/TIGR)
Gene Product: December 6th, 2019
Gene Model: May 21st, 2017
42 days agoznf3 zinc finger protein3:
 
AC206217.2_FG006
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: July 5th, 2019
42 days agoznf4 zinc finger protein4:
 
GRMZM2G048154
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: June 5th, 2017
42 days agoznf5 zinc finger protein5:
 
GRMZM2G001205
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: June 5th, 2017
42 days agoznf6 zinc finger protein6:
 
GRMZM5G804618
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: December 6th, 2019
Gene Model: June 5th, 2017
42 days agocchh6 Cys2His2 Zinc Finger6:
 
AC205250.3_FG004
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: December 6th, 2019
Gene Model: August 23rd, 2018
42 days agotin1 tiller number1: variant has multiple tillers
 
GRMZM2G059088
Zhang, X et al. 2019. Nature communications 10:5608     Reference: December 6th, 2019
Gene Product: December 6th, 2019
Variation: December 6th, 2019
Gene Model: December 6th, 2019
42 days agocchh3 Cys2His2 Zinc Finger3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.05
GRMZM2G023988
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
42 days agocchh7 Cys2His2 Zinc Finger7:
7.01
GRMZM2G144645
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: December 6th, 2019
Gene Model: September 24th, 2018
44 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: September 1st, 2003
Variation: May 11th, 2018
44 days agocsu173  : single copy, novel leaf cDNA sequence
5.05
   Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Variation: September 1st, 2003
44 days agopsbA (cp)  :
 
   Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: September 1st, 2003
44 days agopdrp1 PDK regulatory protein1: encodes a bifunctional protein with two activities; phosphotransferase and protein kinase
2.07
GRMZM2G131286
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: July 28th, 2014
Gene Model: July 28th, 2014
44 days agoatp4 ATP synthase4: Chloroplast PPR-SMR protein. Activates atpB translation. Binds atpB 5'UTR. (A. Barkan, 2015)required for normal accumulation of the chloroplast ATP synthase
 
GRMZM2G128665
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: December 30th, 2015
Variation: June 15th, 2013
Gene Model: June 15th, 2013
44 days agoemb17 embryo defective17: in mutants, embryogenesis is arrested at or before transition stage; encodes plastid initiation factor 3
 
GRMZM2G119691
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: March 8th, 2013
Variation: August 15th, 2013
Gene Model: March 8th, 2013
44 days agoatpc2 ATP synthase chloroplast subunit2: chloroplast ATP synthase (ATPC); gamma subunit based on similarity to Arabidopsis atpc1 (Belcher et al 2015)
 
GRMZM2G048907
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Gene Product: July 17th, 2006
Variation: December 30th, 2015
Gene Model: February 17th, 2015
44 days agocp33b chloroplast RNA-binding protein33b: plastid-specific 30S ribosomal protein
 
GRMZM2G090271
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629   AT2G35410 (TAIR) Reference: December 4th, 2019
Variation: December 4th, 2019
Gene Model: December 4th, 2019
44 days agoriba3 monofunctional riboflavin biosynthesis proteinA3: riboflavin biosynthesis protein ribAB
 
GRMZM2G336908
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629   AT5G59750 (TAIR) Reference: December 4th, 2019
Variation: December 4th, 2019
Gene Model: December 4th, 2019
44 days agoIDP644  :
1.07
GRMZM2G025855
Watkins, KP et al. 2019. Plant J pp.doi: 10.1111/tpj.14629     Reference: December 4th, 2019
Variation: March 31st, 2005
Gene Model: February 14th, 2019
44 days agoIDP447  :
6.00
GRMZM5G871143
    Variation: March 31st, 2005
Gene Model: December 4th, 2019
45 days agoos1 opaque-endosperm, small germ1: opaque crown; kernel larger, lighter color; viable; reduced oil content
2.00 - 2.04
   Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: December 3rd, 2019
Variation: December 6th, 2018
45 days agonlp1 NLP-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
45 days agonlp10 NLP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
45 days agonlp11 NLP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
45 days agonlp12 NLP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
45 days agonlp13 NLP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
45 days agonlp14 NLP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
45 days agonlp16 NLP-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: December 3rd, 2019
45 days agonlp17 NLP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
45 days agoshai1 shohai1: loss of function mutants cause variable morphological defects in the embryo including small scutellum, shoot axis bifurcation and arrest during early organogenesis
 
   Mimura, M et al. 2018. Plant J pp.doi: 10.1111/tpj.13996     Reference: June 15th, 2018
Gene Product: December 3rd, 2019
Variation: June 15th, 2018
45 days agonlp3 NLP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
45 days agonlp4 NLP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
45 days agonlp5 NLP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 3rd, 2019
45 days agonlp6 NLP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
45 days agonlp8 NLP-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
45 days agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G105004
Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
Variation: July 29th, 2004
Gene Model: October 21st, 2018
45 days agonlp7 NLP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.01
GRMZM2G109509
Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
Gene Model: October 7th, 2017
45 days agonrt1 nitrate transport1:
 
GRMZM2G010251
Ge, M et al. 2018. Plant Growth Regulation 84:95-105     Reference: December 3rd, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
45 days agonlp15 NLP-transcription factor 15: involved in modulating the nitrogen responseLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G042278
Ge, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14628     Reference: December 3rd, 2019
Gene Product: December 3rd, 2019
Variation: December 3rd, 2019
Gene Model: October 7th, 2017
47 days agoumc1378  :
7.00
GRMZM2G333337
    Variation: September 1st, 2003
Gene Model: December 1st, 2019
47 days agorpl5a 60S ribosomal protein L5-1 homolog a: endosperm cDNA 5C05D11 (uaz189), similar to ribosomal protein
3.05
GRMZM5G815894
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: December 1st, 2019
Variation: April 9th, 2011
Gene Model: December 28th, 2016
47 days agorpl5b 60S ribosomal protein L5-1 homolog b:
 
GRMZM2G163081
    Gene Product: December 1st, 2019
Variation: April 9th, 2011
Gene Model: July 28th, 2016
47 days agorpl5c 60S ribosomal protein L5, mitochondrial-like homolog c:
 
GRMZM5G831780
    Gene Product: December 1st, 2019
Gene Model: December 1st, 2019
52 days agoxer1 xerico1: encodes a RING finger domain type E3 ubiquitin ligaseOver-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation.
2.07
GRMZM2G018070
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: November 26th, 2019
Gene Model: September 14th, 2017
52 days agoupl1 ubiquitin-protein ligase1: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
2.07
GRMZM2G080439
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: February 14th, 2018
52 days agopco090876  :
4.08
GRMZM2G111818
    Gene Product: November 26th, 2019
Gene Model: November 26th, 2019
52 days agoxer3 xerico3: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G005840
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: November 26th, 2019
Variation: September 14th, 2017
Gene Model: September 14th, 2017
52 days agoxer2 xerico2: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G393349
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: November 26th, 2019
Gene Model: September 14th, 2017
52 days agoxer4 xerico4: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G029623
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: November 26th, 2019
Gene Model: September 14th, 2017
52 days agoupl2 ubiquitin-protein ligase2: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G049141
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl3 ubiquitin-protein ligase3: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G411536
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl4 ubiquitin-protein ligase4: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G461948
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl5 ubiquitin-protein ligase5: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G034622
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl6 ubiquitin-protein ligase6: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G124297
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl7 ubiquitin-protein ligase7: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G380619
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl8 ubiquitin-protein ligase8: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
   Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
52 days agoupl9 ubiquitin-protein ligase9: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G021299
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl10 ubiquitin-protein ligase10: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G328988
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl11 ubiquitin-protein ligase11: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G101098
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
52 days agoupl12 ubiquitin-protein ligase12: encodes a HECT (homologous to the E6AP carboxyl terminus) domain E3 ubiquitin ligase
 
GRMZM2G331368
Li, YF et al. 2019. Genetica pp.doi: 10.1007/s10709-019-00080-4     Reference: November 19th, 2019
Gene Product: November 26th, 2019
Gene Model: November 19th, 2019
56 days agovpp2 vacuolar proton pump2: etiolated leaf cDNA, 5' sequence similar to plant vacuolar ATPase, subunit B
9.03
GRMZM2G094497
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: September 1st, 2003
Variation: May 15th, 2015
Gene Model: May 15th, 2015
56 days agorf2 restorer of fertility2: see rf1; cDNA prf2a complements E. coli mutant deficient in aldehyde dehydrogenase; mitochondrial
9.03
   Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: September 1st, 2003
Variation: December 18th, 2006
56 days agocdo202a(mcf)  : similar to Arabidopsis adenine nucleotide transporter 1
6.07
GRMZM2G067877
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: August 30th, 2018
Gene Model: August 30th, 2018
56 days agoumc1170  :
9.02
GRMZM2G016323
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 1st, 2003
Gene Model: March 7th, 2018
56 days agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
56 days agomate1 multidrug and toxic compound extrusion1: confers aluminum tolerance in lines that carry 3 adjacent identical copies of the mate1 gene (Maron et al 2013)
 
GRMZM5G870170
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: August 17th, 2015
Variation: March 19th, 2013
Gene Model: March 19th, 2013
56 days agome2 NADP-dependent malic enzyme2: cDNA in roots, preprotein contains chloroplast transit peptide sequences and is imported and processed; C3-like enzyme
6.05
GRMZM2G122479
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: June 27th, 2019
Variation: August 24th, 2014
Gene Model: August 21st, 2014
56 days agosut7 sucrose transporter7: single copy cDNA; transcripts observed in mature leaf blades of young plants, and at reproductive stage in various tissues including leaf sheaths, culms, husks, pedicels, with little transcript detected in silks and developing kernels.
9.07
GRMZM2G087901
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: September 14th, 2013
Variation: April 13th, 2017
Gene Model: April 17th, 2013
56 days agoAY110260  :
6.05
GRMZM2G319109
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 25th, 2007
Gene Model: August 27th, 2018
56 days agomstr4 monosaccharide transporter4:
9.04
GRMZM2G034061
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: July 14th, 2008
Gene Model: September 17th, 2015
56 days agoels5 early leaf senescence5: mutant has an early leaf senescence phenotype
 
   Chai, M et al. 2019. Genes 10: 944     Reference: November 22nd, 2019
Variation: November 22nd, 2019
56 days agopco093173  :
6.06
GRMZM2G044137
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 25th, 2007
Gene Model: November 22nd, 2019
56 days agoAY107496  :
9.01
   Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Variation: September 25th, 2007
56 days agotk1 transketolase 1:
9.03
GRMZM2G033208
Dong, ZB et al. 2018. Nucl Acid Res 46:5012-5028     Reference: November 22nd, 2019
Gene Product: March 11th, 2008
Variation: January 29th, 2011
Gene Model: December 21st, 2015
57 days agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
GRMZM2G036340
Knauer, S et al. 2019. Genome Res pp.doi: 10.1101/gr.250878.119     Reference: November 21st, 2019
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
57 days agoglb1 globulin1: was prot1; electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
   Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: September 1st, 2003
Variation: January 29th, 2015
57 days agoglb2 globulin2: presence-absence
1.11
   Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: September 1st, 2003
Variation: March 30th, 2009
57 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
57 days agoy9 pale yellow9: pale endosperm, slightly viviparous; green to pale green seedlings and plants; accumulates 9,15,9'-tri-cis-zeta carotene in dark
10.03 - 10.03
GRMZM2G011746
Wurtzel, E; Beltran, J. 2020. Methods in Molecular Biology 2083:53-61     Reference: November 21st, 2019
Gene Product: December 10th, 2011
Variation: September 28th, 2011
Gene Model: September 22nd, 2011
57 days agoesp5 embryo specific protein5: (was Emb5); cDNA clone, embryo specific, ABA responsive, deduced amino acid sequence very hydrophilic and gly/glu-rich (aka emb5)
6.05
GRMZM2G162659
Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
57 days agohma3 heavy metal ATPase3: associated with leaf Cd concentration under various Cd levels at seedling and maturing stages
 
GRMZM2G175576
Knauer, S et al. 2019. Genome Res pp.doi: 10.1101/gr.250878.119     Reference: November 21st, 2019
Gene Product: October 23rd, 2019
Variation: November 21st, 2019
Gene Model: January 27th, 2018
57 days agopyl3 pyrabactin resistance-like protein3: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G154987
Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
57 days agostk5 serine/threonine-protein kinase5:
 
GRMZM2G334791
Zheng, XX, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00444     Reference: November 21st, 2019
Gene Product: May 13th, 2014
Gene Model: September 19th, 2019
57 days agostiff1 stiff stalk1: mutants have strong stalks
 
GRMZM2G360081
Zhang, ZH, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00486     Reference: November 21st, 2019
Gene Product: July 25th, 2017
Variation: November 5th, 2019
Gene Model: November 5th, 2019
57 days agoGRMZM2G059392  :
 
GRMZM2G059392
Knauer, S et al. 2019. Genome Res pp.doi: 10.1101/gr.250878.119   AT3G53450 (TAIR) Reference: November 21st, 2019
Gene Product: November 21st, 2019
Variation: November 21st, 2019
Gene Model: November 21st, 2019
57 days agoGRMZM2G472643  :
 
GRMZM2G472643
Knauer, S et al. 2019. Genome Res pp.doi: 10.1101/gr.250878.119   AT4G14580 (TAIR) Reference: November 21st, 2019
Variation: November 21st, 2019
Gene Model: November 21st, 2019
57 days agoGRMZM2G050234  :
 
GRMZM2G050234
Knauer, S et al. 2019. Genome Res pp.doi: 10.1101/gr.250878.119     Reference: November 21st, 2019
Variation: November 21st, 2019
Gene Model: November 21st, 2019
58 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Ricci, WA et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0547-0     Reference: November 20th, 2019
Gene Product: July 5th, 2019
Variation: July 24th, 2019
Gene Model: November 20th, 2012
58 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Ricci, WA et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0547-0     Reference: November 20th, 2019
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
58 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Shumskaya, M et al. Methods in Molecular Biology 2083:223-234     Reference: November 20th, 2019
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
58 days agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Fu, JY et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02490-2     Reference: November 20th, 2019
Variation: February 17th, 2019
58 days agomyc7 myc transcription factor7: transcription factor induced by iron starvation; restores yeast fet3 fet4
1.05
GRMZM2G001930
Fu, JY et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02490-2     Reference: November 20th, 2019
Gene Product: September 14th, 2016
Variation: November 10th, 2005
Gene Model: July 28th, 2016
58 days agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Ricci, WA et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0547-0     Reference: November 20th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
59 days agocdpk13 calcium dependent protein kinase13: E. coli expressed fusion protein does not appear to require calcium
 
GRMZM2G173928
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: December 3rd, 2013
Variation: November 15th, 2013
Gene Model: March 31st, 2015
59 days agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: September 20th, 2012
Variation: October 5th, 2012
59 days agocitt1 citrate transporter1:
1.01
GRMZM2G028521
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Variation: April 26th, 2016
Gene Model: April 26th, 2016
59 days agoumc15a  :
4.08
GRMZM2G013128
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Variation: September 1st, 2003
Gene Model: June 7th, 2018
59 days agostp1 sugar transport1: leaf cDNA csu142 similar to yeast plasma membrane sugar transport protein, single copy
8.03
   Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: September 1st, 2003
Variation: August 26th, 2015
59 days agorfa1 replication factor A homolog1: endosperm cDNA 5C09D05, similar to yeast DNA binding protein
 
   Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Gene Product: September 1st, 2003
Variation: December 30th, 2010
59 days agosrph1 SGT1 disease resistance protein homolog1: interacts with RACK1 protein involved in disease resistance (Wang et al 2014)
3.09
GRMZM2G105019
Zheng, ZH et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00752     Reference: November 19th, 2019
Variation: March 31st, 2005
Gene Model: March 23rd, 2015
60 days agopebp5 phosphatidylethanolamine-binding protein:
 
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Variation: January 31st, 2011
60 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
60 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: December 18th, 2014
Variation: November 8th, 2007
60 days agozhd21 ZF-HD-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM5G821755
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Variation: March 21st, 2018
Gene Model: March 21st, 2018
60 days agowox3a WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007)
6.01
GRMZM2G122537
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: August 25th, 2017
Variation: August 19th, 2018
Gene Model: August 18th, 2018
60 days agoyab1 C2C2-YABBY-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: October 16th, 2015
60 days agotcptf21 TCP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Gene Product: September 27th, 2019
60 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Liu, L et al. 2019. Mol Breed 39:157     Reference: November 18th, 2019
Variation: June 9th, 2014
Gene Model: June 9th, 2014
63 days agoaco1 aconitase1: electrophoretic mobility; monomeric
4.04
GRMZM2G020801
Eprintsev, AT et al. 2015. J Plant Physiol 181:14-19     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Variation: March 28th, 2015
Gene Model: March 28th, 2015
63 days agoaco3 aconitase3: electrophoretic mobility
9.07
GRMZM2G009808
Eprintsev, AT et al. 2015. J Plant Physiol 181:14-19     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Gene Model: March 29th, 2015
63 days agokrp15 kinesin-related protein15:
10.04
GRMZM2G054418
Zhang, J et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.13048     Reference: November 15th, 2019
Gene Product: November 10th, 2017
Variation: January 3rd, 2013
Gene Model: March 3rd, 2016
63 days agoAI668346  :
2.08
GRMZM2G464000
Zhang, J et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.13048     Reference: November 15th, 2019
Variation: July 29th, 2004
Gene Model: January 30th, 2018
63 days agoaco6 aconitase6:
 
GRMZM2G364988
Eprintsev, AT et al. 2019. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2019.11.018     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
63 days agoaco7 aconitase7:
 
GRMZM2G036131
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
63 days agoaco8 aconitase8:
 
GRMZM2G467338
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
63 days agoaco9 aconitase9:
 
GRMZM2G029204
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
63 days agoaco10 aconitase10:
 
GRMZM2G127429
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
63 days agoaco11 aconitase11:
 
GRMZM2G311024
    Gene Product: September 1st, 2003
Gene Model: November 15th, 2019
63 days agoaco2 aconitase2: electrophoretic mobility
10.04
GRMZM5G858454
Eprintsev, AT et al. 2019. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2019.11.018     Reference: November 15th, 2019
Gene Product: September 1st, 2003
Variation: September 3rd, 2013
Gene Model: March 29th, 2015
65 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Feng, C et al. 2019. Plant J pp.DOI: 10.1111/tpj.14606     Reference: November 13th, 2019
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
67 days agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
De Vos, D et al. 2019. New Phytol pp.doi: 10.1111/nph.16315     Reference: November 11th, 2019
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
67 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
67 days agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
   He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 10th, 2011
Variation: March 30th, 2011
67 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 13th, 2011
Variation: March 4th, 2014
67 days agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 13th, 2011
Variation: March 25th, 2017
Gene Model: March 24th, 2017
67 days agohyd4 hydroxylase4: beta-carotene hydroxylase
 
GRMZM2G164318
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
67 days agocyp14 cytochrome P450 14: encodes CYP97C
 
GRMZM2G143202
He, WW et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125779.     Reference: November 11th, 2019
Gene Product: June 3rd, 2015
Variation: June 3rd, 2015
Gene Model: April 8th, 2013
70 days agotipd1 tip growth defective1: contributes to root hair elongation and drought tolerance
 
GRMZM2G087806
Zhang, XM et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13290   AT5G20350 (TAIR) Reference: November 8th, 2019
Gene Product: November 8th, 2019
Variation: November 8th, 2019
Gene Model: November 8th, 2019
70 days agocdpk30 calcium dependent protein kinase30: encodes a calcium-dependent protein kinase
 
GRMZM2G112057
Zhang, XM et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13290     Reference: November 8th, 2019
Gene Product: December 3rd, 2013
Gene Model: November 8th, 2019
70 days agovp16 viviparous16: novel vivipary mutation found in cross of W22::Mu and Z31
 
   Liu, ST et al. 2019. Int J Mol Sci 20:5586     Reference: November 8th, 2019
Variation: November 8th, 2019
71 days agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
   Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: July 8th, 2009
Variation: March 22nd, 2006
71 days agoaox1 alternative oxidase1 : primers give PCR product closely similar to alternative oxidase in other species
2.02
AC233960.1_FG002
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: February 22nd, 2012
Variation: February 22nd, 2012
Gene Model: February 17th, 2012
71 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
71 days agoatp11 ATPase11:
 
GRMZM2G115372
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: November 7th, 2019
Gene Model: November 7th, 2019
71 days agocox11 cytochrome c oxidase11:
 
GRMZM2G338696
Chaengsakul, C et al. 2019. J Integr Agric 18:2435-2445     Reference: November 7th, 2019
Gene Product: September 1st, 2003
Gene Model: November 7th, 2019
71 days agordph1 reducing plant height1: over-expression leads to plants with significantly shorter and wider mesocotyls with parenchyma cells showing reduced length but increased width
 
GRMZM2G114190
Li, W et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13292     Reference: November 7th, 2019
Gene Product: November 7th, 2019
Gene Model: November 7th, 2019
73 days agorad51c recombination protein51 gene c: mutant is both male and female sterile
 
GRMZM2G123089
Jing, JL et al. 2019. Int J Mol Sci 20:5513     Reference: November 5th, 2019
Gene Product: August 12th, 2016
Variation: November 5th, 2019
Gene Model: June 19th, 2014
73 days agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM2G147716
Wu, JR et al. 2019. Proc Natl Acad Sci, USA pp.doi; 10.1073/pnas.1902593116     Reference: November 5th, 2019
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
74 days agotlc14 TRAM/LAG/CRN8 14: encodes a TLC (TRAM/LAG/CRN8) domain protein
8.01
GRMZM2G020148
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Variation: September 1st, 2003
Gene Model: September 14th, 2018
74 days agotlc17 TRAM/LAG/CRN8 17: encodes a TLC (TRAM/LAG/CRN8) domain protein
8.08
GRMZM5G825226
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: September 2nd, 2018
74 days agotlc6 TRAM/LAG/CRN8 6: encodes a TLC (TRAM/LAG/CRN8) domain protein
3.06
GRMZM2G077279
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc7 TRAM/LAG/CRN8 7: encodes a TLC (TRAM/LAG/CRN8) domain protein
3.06
GRMZM2G021589
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc1 TRAM/LAG/CRN8 1: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G151521
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc2 TRAM/LAG/CRN8 2: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G429128
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc3 TRAM/LAG/CRN8 3: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G138330
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc4 TRAM/LAG/CRN8 4: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G132084
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc5 TRAM/LAG/CRN8 5: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G163426
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc8 TRAM/LAG/CRN8 8: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G170868
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc9 TRAM/LAG/CRN8 9: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
AC210013.4_FG012
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc11 TRAM/LAG/CRN8 11: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G444643
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc12 TRAM/LAG/CRN8 12: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G315726
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc13 TRAM/LAG/CRN8 13: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G016551
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc15 TRAM/LAG/CRN8 15: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
   Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
74 days agotlc16 TRAM/LAG/CRN8 16: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G075023
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc18 TRAM/LAG/CRN8 18: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G083427
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
74 days agotlc10 TRAM/LAG/CRN8 10: encodes a TLC (TRAM/LAG/CRN8) domain protein
5.02
GRMZM2G016184
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
76 days agomterf10 mTERF domain protein10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yang, Y-Z et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz204     Reference: November 2nd, 2019
Gene Product: February 19th, 2015
Variation: June 14th, 2019
76 days agoppr20 pentatricopeptide repeat 20: mutants arrest maize seed development; display slow embryo and endosperm development
 
GRMZM5G818978
Yang, Y-Z et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz204     Reference: November 2nd, 2019
Gene Product: December 27th, 2016
Variation: November 2nd, 2019
Gene Model: November 2nd, 2019
76 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Zhang, L et al. 2019. Transgenic Research pp.doi: 10.1007/s11248-019-00180-z     Reference: November 2nd, 2019
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
79 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: October 30th, 2019
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
79 days agopan1 pangloss1: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM5G836190
Doblas-Ibanez, P et al. 2019. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-05-19-0129-R     Reference: October 30th, 2019
Gene Product: November 27th, 2012
Variation: July 11th, 2014
Gene Model: November 2nd, 2011
79 days agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: April 11th, 2007
Variation: August 20th, 2010
79 days agose1 sugary-enhancer1: high sugar content with su1; light yellow endosperm; freely wrinkled in Ill677a
2.10 - 2.10
AC217415.3_FG004
Zhang, X, et al. 2019. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1902747116     Reference: October 30th, 2019
Gene Product: September 24th, 2019
Variation: May 4th, 2015
Gene Model: May 2nd, 2015
79 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: July 5th, 2019
Variation: December 17th, 2014
79 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: August 21st, 2018
Variation: July 7th, 2017
79 days agobde1 bearded-ear1: floral development MADS box transcription factor; recessive mutant has silky-polytypic-like ear
5.06
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044   AT2G45650 (TAIR) Reference: October 30th, 2019
Gene Product: April 1st, 2011
Variation: October 5th, 2009
79 days agozag1 Zea AGAMOUS homolog1: amino acid sequence, deduced from cDNA to inflorescence mRNA, 61% identical to Arabidopsis floral homeotic gene protein AG1; expression strong in female inflorescence; possibly pt1; SSR umc1187
6.05
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2015
80 days agowrky67 WRKY-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bo, C et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02481-3     Reference: October 29th, 2019
Gene Product: July 24th, 2017
84 days agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: October 25th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
84 days agorafs2 raffinose synthase2:
 
GRMZM2G050177
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: October 25th, 2019
Gene Model: March 1st, 2018
84 days agorafs3 raffinose synthase3:
 
   Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: October 25th, 2019
84 days agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Gene Product: October 25th, 2019
Variation: September 20th, 2018
Gene Model: September 20th, 2018
85 days agopebp2 phosphatidylethanolamine-binding protein2:
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: December 15th, 2010
85 days agopebp4 phosphatidylethanolamine-binding protein4:
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: December 15th, 2010
85 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
85 days agopebp24 phosphatidylethanolamine-binding protein24:
 
GRMZM2G440005
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: December 14th, 2010
Gene Model: July 28th, 2016
85 days agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
85 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: October 24th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
85 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: October 5th, 2018
85 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: August 21st, 2018
Variation: February 6th, 2011
85 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: September 1st, 2003
Variation: April 15th, 2008
85 days agocyc10 cyclin10: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G107377
Qiao, P et al. 2019. G3 pp.doi: 10.1534/g3.119.400757     Reference: October 24th, 2019
Gene Product: June 26th, 2009
Variation: December 21st, 2016
Gene Model: December 21st, 2016
86 days agoaasr5 abscisic acid stress ripening5:
10.04
GRMZM2G052100
Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
86 days agoga2ox12 gibberellin 2-oxidase12:
 
GRMZM2G177104
Zhang, Y et al. 2019. Plants doi: 10.3390/plants8100432     Reference: October 23rd, 2019
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
86 days agohma6 heavy metal ATPase6:
4.08
GRMZM2G315931
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma4 heavy metal ATPase4:
 
GRMZM2G455491
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: January 27th, 2018
86 days agohma2 heavy metal ATPase2: associated with leaf Cd concentration under low Cd condition at the seedling stage
 
GRMZM2G099191
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma1 heavy metal ATPase1:
 
GRMZM2G067853
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma5 heavy metal ATPase5:
 
GRMZM2G144083
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma7 heavy metal ATPase7:
 
GRMZM2G029951
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma8 heavy metal ATPase8:
 
GRMZM5G855347
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma9 heavy metal ATPase9:
 
GRMZM2G151406
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma10 heavy metal ATPase10:
 
GRMZM2G143512
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agohma11 heavy metal ATPase11:
 
GRMZM2G010152
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
86 days agodbf3 DRE-binding protein3: regulates rafs1 expression and raffinose biosynthesis and plant chilling stress tolerance
2.07
   Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: April 10th, 2013
Variation: October 23rd, 2019
88 days agopin9 PIN-formed protein9: similar to Arabidopsis PIN9 (Forestan et al 2012)
3.06
GRMZM5G859099
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
88 days agocyc3 cyclin3: classIII; sense RNA functions in Xenopus oocytes; SSR umc1186
6.02
   Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: June 26th, 2009
Variation: January 17th, 2014
88 days agocyc7 cyclin7: Class I; sense RNA functions in Xenopus oocytes
3.06
GRMZM2G073003
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: June 26th, 2009
Variation: October 23rd, 2012
Gene Model: August 16th, 2019
88 days agotir1 transport inhibitor response1: encodes a member of a class of F-BOX proteins shown to bind auxin and facilitate degradation of the transcriptional repressor Aux/IAA proteins
 
GRMZM2G135978
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154   LOC_Os05g05800 (MSU/TIGR)
Os05g0150500 (Gramene)
Reference: October 21st, 2019
Gene Product: July 25th, 2017
Gene Model: December 28th, 2018
88 days agoaas8 auxin amido synthetase8: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G053338
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas1 auxin amido synthetase1: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G068701
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas2 auxin amido synthetase2: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G378106
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas3 auxin amido synthetase3: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G410567
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795   AT1G28130 (TAIR) Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas4 auxin amido synthetase4: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G061005
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas5 auxin amido synthetase5: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G060991
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas6 auxin amido synthetase6: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G061515
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas7 auxin amido synthetase7: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G033359
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas9 auxin amido synthetase9: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G414460
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795   AT2G47750 (TAIR) Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas11 auxin amido synthetase11: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G162413
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas12 auxin amido synthetase12: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G366873
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas13 auxin amido synthetase13: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G091276
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agoaas10 auxin amido synthetase10: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
8.03
GRMZM2G001421
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
88 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
90 days agovpp8 vacuolar proton pump8: encodes a vacuolar H+-ATPase subunit
7.04
GRMZM2G019999
Kang, C et al. 2019. Int J Mol Sci 20:E5125     Reference: October 19th, 2019
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
90 days agovpp10 vacuolar proton pump10: encodes a vacuolar H+-ATPase subunit
 
GRMZM2G163233
Kang, C et al. 2019. Int J Mol Sci 20:E5125     Reference: October 19th, 2019
Gene Product: September 1st, 2003
Gene Model: October 19th, 2019
3 months agonactf87 NAC-transcription factor 87: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jimenez-Galindo, JC et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-2052-z     Reference: October 17th, 2019
Gene Product: July 8th, 2019
3 months agolac2 laccase2:
6.05
GRMZM2G146152
Jimenez-Galindo, JC et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-2052-z     Reference: October 17th, 2019
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
3 months agoclt1 clumped tassel1: dominant Clt1 plants have variable dwarfing, developmental anomalies
8.06 - 8.06
GRMZM2G017305
Lau, KH. 2016. Co-orthologs of KATANIN1 impact plant morphology and show differential evolution in maize. Ph.D. dissertation, Purdue University, 145pp     Reference: October 15th, 2019
Gene Product: October 15th, 2019
Variation: October 16th, 2019
Gene Model: October 15th, 2019
3 months agoufg25  : Candidate for kernel row number trait (qKRN5b)
5.01
GRMZM2G094900
Shen, XM et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03436-8     Reference: October 15th, 2019
Variation: October 15th, 2019
Gene Model: June 16th, 2018
3 months agoktn2 katanin2: paralog of clt1
 
GRMZM2G054663
Lau, KH. 2016. Co-orthologs of KATANIN1 impact plant morphology and show differential evolution in maize. Ph.D. dissertation, Purdue University, 145pp     Reference: October 15th, 2019
Gene Product: October 15th, 2019
Variation: October 15th, 2019
Gene Model: October 15th, 2019
3 months agotcptf39 TCP-transcription factor 39: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gyawali, A et al. 2019. BMC Plant Biology 19:412     Reference: October 8th, 2019
Gene Product: September 27th, 2019
3 months agostk2 serine-threonine kinase2: Sequence orthologous to rice stk2, in maize BAC contig overlapping b0178I03 and b0004G18 (Alleman 2006)
2.04
GRMZM2G179268
Javeed, A et al. 2019. Applied Ecology and Environmental Research 17:1789-11802     Reference: October 7th, 2019
Gene Product: May 13th, 2014
Gene Model: January 9th, 2017
Recommended by Ed Coe:
May 1st, 2007
3 months agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: June 6th, 2011
Variation: January 29th, 2018
3 months agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
Os05g0580500 (Gramene)
Reference: October 7th, 2019
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
3 months agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: February 24th, 2015
Variation: March 16th, 2018
3 months agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: November 4th, 2014
Variation: December 4th, 2018
3 months agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
3 months agomus1 MutS homolog1: cDNA similar to E. coli mutS
7.04
GRMZM2G056075
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
3 months agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 25th, 2006
Variation: September 25th, 2017
3 months agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: November 4th, 2014
Variation: January 9th, 2019
3 months agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: April 21st, 2016
Variation: June 6th, 2016
3 months agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 14th, 2016
Variation: October 7th, 2010
3 months agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: June 4th, 2008
Variation: March 8th, 2019
3 months agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
3 months agozyp1 synaptonemal complex protein ZIPPER1: Homlogous to Yeast ZIPPER1 (ZIP1), Arabidopsis ZYP1 and rice ZEP1.
 
GRMZM2G143590
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: March 2nd, 2011
Variation: March 2nd, 2011
Gene Model: June 19th, 2014
3 months agosweet15a sugars will eventually be exported transporter15a:
4.05
GRMZM2G168365
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: September 1st, 2003
Gene Model: November 3rd, 2015
3 months agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
GRMZM2G064382
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
3 months agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: September 1st, 2003
Variation: January 5th, 2018
3 months agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
3 months agosweet11a sugars will eventually be exported transporter11:
1.06
GRMZM2G368827
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
3 months agohp3 histidine-containing phosphotransfer protein3:
4.08
GRMZM2G451604
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: April 4th, 2015
Gene Model: April 4th, 2015
3 months agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
3 months agosweet6b sugars will eventually be exported transporter6b:
 
GRMZM2G416965
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
3 months agosweet13b sugars will eventually be exported transporter13b:
 
GRMZM2G021706
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
3 months agosweet14b sugars will eventually be exported transporter14b:
 
GRMZM2G015976
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
3 months agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: May 12th, 2017
Gene Model: January 27th, 2017
3 months agomre11a meiotic recombination protein 11 homolog A: transgenic expression has positive role in plant salt tolerance (Luo et al., 2019)
 
GRMZM2G106056
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: May 10th, 2017
Gene Model: January 27th, 2017
3 months agosweet13a sugars will eventually be exported transporter13a:
10.03
GRMZM2G173669
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: December 28th, 2017
3 months agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Javeed, A et al. 2019. Applied Ecology and Environmental Research 17:1789-11802     Reference: October 7th, 2019
Gene Product: May 13th, 2014
Variation: October 10th, 2018
3 months agobub3 budding inhibited by benzimidazoles homolog3: encodes WD40 repeat-like superfamily protein that is a mitotic checkpoint
9.02
GRMZM5G899300
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: January 16th, 2017
Gene Model: January 15th, 2017
3 months agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
GRMZM2G170839
de O Buanafina, MM et al. 2019. Planta pp.doi: 10.1007/s00425-019-03288-y     Reference: October 3rd, 2019
Gene Product: September 1st, 2003
Variation: October 17th, 2018
Gene Model: October 15th, 2018
3 months agoasg75  : NCBI: similar to Arabidopsis lipase class 3 family protein
1.04
GRMZM5G882821
de O Buanafina, MM et al. 2019. Planta pp.doi: 10.1007/s00425-019-03288-y     Reference: October 3rd, 2019
Variation: September 19th, 2009
Gene Model: June 30th, 2017
3 months agoaldh22 aldehyde dehydrogenase22: NCBI: similar to Arabidopsis aldehyde dehydrogenase 22A1
7.06
GRMZM2G135341
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: April 11th, 2017
Gene Model: April 11th, 2017
3 months agogpn1 glyceraldehyde-3-phosphate deHaseN1: cDNA sequence
4.05
GRMZM2G035268
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: June 8th, 2010
Gene Model: July 27th, 2016
3 months agoaldh5 aldehyde dehydrogenase5: cDNA similar to rf2 (prf2d-exprA7); complements E. coli
3.09
GRMZM2G097706
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: June 28th, 2005
Variation: June 20th, 2012
Gene Model: September 30th, 2015
3 months agomis1 putative aldehyde dehydrogenase MIS1:
 
GRMZM2G090087
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: January 15th, 2011
Gene Model: January 22nd, 2016
3 months agoaldh7 aldehyde dehydrogenase7:
 
GRMZM2G365483
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh8 aldehyde dehydrogenase8:
 
GRMZM2G325115
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh14 aldehyde dehydrogenase14:
 
GRMZM2G060800
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh11 aldehyde dehydrogenase11:
 
GRMZM2G013214
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh15 aldehyde dehydrogenase15:
 
GRMZM2G119482
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh16 aldehyde dehydrogenase16:
 
GRMZM2G128114
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh18 aldehyde dehydrogenase18:
 
GRMZM2G122172
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh19 aldehyde dehydrogenase19:
 
GRMZM2G365440
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh23 aldehyde dehydrogenase23:
 
GRMZM2G407949
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh25 aldehyde dehydrogenase25:
 
GRMZM2G103546
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh26 aldehyde dehydrogenase26:
 
GRMZM2G135470
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh27 aldehyde dehydrogenase27:
 
GRMZM2G155502
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh28 aldehyde dehydrogenase28:
 
GRMZM2G354187
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh9 aldehyde dehydrogenase9:
 
GRMZM2G016189
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh10 aldehyde dehydrogenase10:
 
GRMZM5G811837
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh12 aldehyde dehydrogenase12:
 
GRMZM5G820733
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh13 aldehyde dehydrogenase13:
 
GRMZM2G118800
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh20 aldehyde dehydrogenase20:
 
GRMZM2G130440
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh24 aldehyde dehydrogenase24:
 
GRMZM2G398633
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh17 aldehyde dehydrogenase17:
5.05
GRMZM2G169458
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh21 aldehyde dehydrogenase21:
7.02
GRMZM2G001898
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
3 months agoaldh2 aldehyde dehydrogenase2: cDNA similar to rf2; transgene in E. coli shows aldehyde dehydrogenase activity, but unable to complement the ALDH deficient E. coli mutant; mitochondrial location inferred from presence of leader sequence
4.06
GRMZM2G125268
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: May 13th, 2009
Gene Model: September 30th, 2015
3 months agoaldh3 aldehyde dehydrogenase3: cDNA sequence similar to rf2; complements E. coli JA111 with defective ALDH
3.09
GRMZM2G071021
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: June 28th, 2005
Variation: May 20th, 2009
Gene Model: October 6th, 2015
3 months agoznf1 zinc finger protein1: glucose starved, root tip cDNA
9.03
GRMZM5G836222
Marques, TL et al. 2020. Acta Scientiarum Agronomy 42: e43479     Reference: September 30th, 2019
Gene Product: September 1st, 2003
Variation: January 14th, 2019
Gene Model: January 13th, 2019
3 months agofbl41 F-box protein41: mutants have greater resistance to Rhizoctonia solani; rice overexpressing ZmFBL41 showed elevated susceptibility to R. solani.
 
GRMZM2G109140
Li, N et al. 2019. Nature Genetics pp.doi: 10.1038/s41588-019-0503-y     Reference: September 30th, 2019
Gene Product: July 25th, 2017
Variation: September 30th, 2019
Gene Model: September 30th, 2019
3 months agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Hughes, TE et al. 2019. Development pp.doi: 10.1242/dev.177543     Reference: September 28th, 2019
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
3 months agogras37 GRAS-transcription factor 37: In double mutants with scro1, most leaf veins are separated by one rather than two mesophyll cells Hughes et al., 2019)
 
   Hughes, TE et al. 2019. Development pp.doi: 10.1242/dev.177543     Reference: September 28th, 2019
Gene Product: June 24th, 2019
Variation: June 24th, 2019
3 months agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
GRMZM2G110242
Pecher, P et al. 2019. PloS Pathogens 15: e1008035   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene)
Reference: September 27th, 2019
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
3 months agotcptf10 TCP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf11 TCP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf12 TCP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf13 TCP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf14 TCP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf15 TCP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf16 TCP-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf18 TCP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf19 TCP-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf20 TCP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf22 TCP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf23 TCP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf24 TCP-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf25 TCP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf26 TCP-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf27 TCP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf28 TCP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf30 TCP-transcription factor 30: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf31 TCP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf32 TCP-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf34 TCP-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf35 TCP-transcription factor 35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf36 TCP-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf37 TCP-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf38 TCP-transcription factor 38: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf4 TCP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf40 TCP-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf41 TCP-transcription factor 41: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf42 TCP-transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf44 TCP-transcription factor 44: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf5 TCP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf6 TCP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf7 TCP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf8 TCP-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agotcptf9 TCP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
3 months agobhlh82 bHLH-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, HL, et al. 2019. PLoS Genetics. 15:e1008377     Reference: September 27th, 2019
Gene Product: September 14th, 2016
Variation: August 30th, 2019
3 months agotcptf29 TCP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G148022
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Gene Model: September 24th, 2018
3 months agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Dong, ZB, et al. 2019. Nature communications. 10:3810     Reference: September 27th, 2019
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
3 months agotcptf33 TCP-transcription factor 33: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to Arabidopsis transcription factor TCP4
3.01
AC205574.3_FG006
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Gene Model: November 22nd, 2017
3 months agotcptf43 TCP-transcription factor 43: Mapped upper band to this site.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.simiiar to Arabidosis transcription factor TCP2
2.10
GRMZM2G020805
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Variation: February 28th, 2017
Gene Model: February 28th, 2017
3 months agotcptf2 TCP-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G003944
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Variation: March 17th, 2017
Gene Model: March 17th, 2017
3 months agopan2 pangloss2: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM2G034572
Wang, HL, et al. 2019. PLoS Genetics. 15:e1008377     Reference: September 27th, 2019
Gene Product: November 27th, 2012
Variation: November 27th, 2012
Gene Model: November 27th, 2012
3 months agovpsh26 vacuolar protein sorting homolog26: endosperm cDNA 5C06F05 similar to conserved vertebrate embryogenesis protein
10.03
GRMZM2G136563
Chen, L et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13267     Reference: September 26th, 2019
Gene Product: September 1st, 2003
Variation: October 15th, 2015
Gene Model: September 26th, 2019
3 months agovps29 vacuolar protein sorting29: Involved in kernel morphology variance
 
GRMZM2G068489
Chen, L et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13267     Reference: September 26th, 2019
Variation: September 26th, 2019
Gene Model: September 26th, 2019
3 months agolls1 lethal leaf spot1: chlorotic-necrotic lesions resembling Helminthosporium carbonum infection
1.01
   Johal et al. 1994. Maydica 39:69-76     Reference: September 25th, 2019
Gene Product: November 5th, 2014
Variation: September 12th, 2018
3 months agoles22 lesion22: (was Les*-J2552, les29) dominant leaf lesions,early-medium timing, small size, white color; porphyria
1.04
GRMZM2G044074
Johal et al. 1994. Maydica 39:69-76     Reference: September 25th, 2019
Gene Product: September 1st, 2003
Variation: April 1st, 2015
Gene Model: August 16th, 2017
3 months agondl1 needle1: displays severe reproductive defects and strong genetic interactions with known mutants affected in the regulation of the plant hormone auxin
 
GRMZM2G038401
Liu, QJ et al. 2019. Proc Natl Acad Sci, USA 116:19736-19742     Reference: September 25th, 2019
Gene Product: September 10th, 2019
Variation: September 10th, 2019
Gene Model: September 10th, 2019
3 months agoles1 lesion1: dominant Les1 plants have large necrotic lesions resembling disease lesions formed by fungal infections on susceptible lines
2.03 - 2.04
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles10 lesion10: like Les1; numerous small, round, necrotic lesions
2.04 - 2.06
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: November 29th, 2004
3 months agoles2 lesion2: dominant Les2 plants have small white lesions resembling disease lesions formed by fungal infections on resistant lines
1.02 - 1.02
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles4 lesion4: dominant Les4 plants have late expression of large necrotic lesions on leaf blade and sheath
2.08 - 2.09
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles5 lesion5: like les2
1.05 - 1.06
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: May 10th, 2015
3 months agoles6 lesion6: like les4, but with many small to medium, irregular, mottled spots
10.00 - 10.03
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles7 lesion7: dominant Les7 plants have late expression of small chlorotic lesions
 
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles11 lesion11: dominant Les11 plants have large lesions, variable with conditions and background; can be expressed in leaf 1 & 2
2.01 - 2.02
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles*-N1378 lesion candidate 1378: Time late (41-day, 11-leaf); small to large elliptical brown necrotic lesions on leaf blade, sheath; frequency 8-10 in clusters with satellites.
 
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoles21 lesion21: Dominant Les21 plants have medium-sized early lesions
 
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
3 months agoabi12 ABI3-VP1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tian, JG, et al. 2019. Science. 365:658-664     Reference: August 22nd, 2019
Variation: September 20th, 2019
4 months agoili1 increased leaf inclination1: knockout mutants confer decreased leaf angle
 
GRMZM2G072820
Ren, ZZ et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13255   LOC_Os04g54900 (MSU/TIGR)
Os04g0641700 (Gramene)
Reference: September 19th, 2019
Gene Product: September 14th, 2016
Variation: September 19th, 2019
Gene Model: September 19th, 2019
4 months agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Gene Product: September 1st, 2003
Variation: September 8th, 2018
4 months agodek12 defective kernel12: collapsed endosperm; lethal; cultured embryos green, narrow-leaved, curled
9.00 - 9.03
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
4 months agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf marginscytokinin receptor; cytokinin responsive histidine protein kinase
5.06 - 5.07
GRMZM2G151223
Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Gene Product: May 20th, 2016
Variation: August 23rd, 2019
Gene Model: August 23rd, 2019
4 months agoles3 lesion3: like les1; large, elliptical, necrotic lesions
10.02 - 10.03
   Walbot, V et al. 1983. pp.431-442 in Kosuge, T et al. 1983.Plenum Press, NY     Reference: September 18th, 2019
Variation: May 20th, 2006
4 months agoles8 lesion8: dominant Les8 plants have late expression of small, pale green lesions
9.02
   Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Variation: September 1st, 2003
4 months agolxm1 lax midrib1: dominant Lxm1 plants have leaves with wide, flat, flexible midrib. Leaf-like structures (flaps) can form on the surface of the leaf above veins.
3.06
   Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Variation: September 1st, 2003
4 months agoles12 lesion12: dominant Les12 plants have many small to medium, chlorotic to necrotic lesions on the leaf blade beginning at 5 leaf stage
10.00 - 10.03
   Walbot, V et al. 1983. pp.431-442 in Kosuge, T et al. 1983.Plenum Press, NY     Reference: September 18th, 2019
Variation: October 21st, 2003
4 months agorld1 rolled leaf1: in dominant Rld1 plants, leaves are tightly rolled and tend to be entangled; ligular flaps on abaxial surface of leaf; resembles Ce1
9.07 - 9.08
   Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Gene Product: October 6th, 2015
Variation: June 30th, 2012
4 months agodnj*-N1534 defective navajoN1534: crumpled floury defective kernel with tendency for normal tissue around the silk attachment. Embryos germinate in tissue culture and grow best on enriched media; nonviable seedling
5.05 - 5.09
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
4 months agomn5 miniature5: small kernel with loose pericarp, tiny green seedling
5.04
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: February 9th, 2006
4 months agorgh*-N1524 roughN1524: floury etched kernel; grainy virescent seedling
10.00 - 10.02
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
4 months agosmk*-N1529 small kernelN1529: small kernel; yellow green necrotic seedling
5.00 - 5.04
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
4 months agosn1 scutellar node color1: anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Lc1 and Hopi1)
10.06
   Gavazzi, G et al. pp.91-103 in Reddy, GM and Coe, EH (eds). 1986. Gene Structure and Function in Higher Plants     Reference: September 17th, 2019
Gene Product: September 1st, 2003
Variation: December 24th, 2009
4 months agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Fang, H et al. 2019. Plant J pp.doi: 10.1111/tpj.14539     Reference: September 17th, 2019
Gene Product: August 17th, 2004
Variation: September 17th, 2019
Gene Model: December 9th, 2011
4 months agobnlg565  : similar to Arabidopsis folate transporter 1
5.01
GRMZM5G840435
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Variation: September 1st, 2003
Gene Model: June 15th, 2018
4 months agocsu582  : similar to Arabidopsis Pyridoxal biosynthesis protein PDX1.3
7.00
GRMZM2G120652
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Variation: September 1st, 2003
Gene Model: September 4th, 2018
4 months agobm4 brown midrib4: mutant looks like bm1; encodes folylpolyglutamate synthetase
9.08
GRMZM2G393334
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
4 months agogpc4 glyceraldehyde-3-phosphate dehydrogenase4: C subunit, electrophoretic mobility, coding sequence homology to gpc3, unique 3' untranslated region
5.05
GRMZM2G176307
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: September 1st, 2003
Variation: December 13th, 2012
Gene Model: August 12th, 2014
4 months agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
4 months agodek33 defective kernel33: opaque, floury, dented, wrinkled kernel with floury endosperm; occasionally viviparous
5.04 - 5.05
GRMZM2G090068
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: November 13th, 2018
Variation: November 13th, 2018
Gene Model: November 13th, 2018
4 months agorrb2 related to retinoblastoma2: alternatively spliced cDNAs, ubiquitous, see rrb1
4.08
   Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: September 1st, 2003
Variation: April 17th, 2015
4 months agocyp25 cytochrome P-450 25:
4.09
GRMZM2G070508
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: March 25th, 2019
Gene Model: June 8th, 2018
4 months agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: November 13th, 2014
Variation: July 24th, 2008
4 months agosmk2 small kernel2: mutants are recessive embryo-lethal small kernel
4.10
GRMZM2G023528
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: April 14th, 2017
Variation: April 14th, 2017
Gene Model: April 14th, 2017
4 months agoc3h32 C3H-transcription factor32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
AC233871.1_FG008
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Variation: July 29th, 2004
Gene Model: June 21st, 2019
4 months agomybr88 MYB-related-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G064328
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Variation: September 1st, 2003
Gene Model: December 6th, 2016
4 months agoko2 kaurene oxidase2:
 
GRMZM2G161472
Ding, YZ et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0509-6     Reference: September 16th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agofgp2 folylpolyglutamate synthetase2: Paralog of bm4 also encoding FPGS
 
GRMZM5G869779
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
4 months agoacco15 1-aminocyclopropane-1-carboxylate oxidase15:
 
GRMZM2G166639
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
4 months agoslac4 slow anion channel-associated4:
 
GRMZM2G169951
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: February 1st, 2018
Gene Model: February 1st, 2018
4 months agoirt1 iron-regulated transporter1:
 
GRMZM2G118821
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
4 months agodek140 defective kernel140: mutant abolished the C-to-U editing of cox3-314, nad2-26 and nad5-1916 leads to accumulated reactive oxygen species and promoted programmed cell death in endosperm cells due to the dysfunction of mitochondrial complex I and IV
 
GRMZM2G304965
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: December 27th, 2016
Variation: September 7th, 2019
Gene Model: September 7th, 2019
4 months agokr1 kauralexin reductase1:
 
GRMZM2G394968
Ding, YZ et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0509-6     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Gene Model: September 16th, 2019
4 months agokr2 kauralexin reductase2:
 
GRMZM2G073929
Ding, YZ et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0509-6     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Gene Model: September 16th, 2019
4 months agoGRMZM2G095400  :
 
GRMZM2G095400
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Gene Model: September 16th, 2019
4 months agobio1 biotin1: knockout mutant has defective embryo
 
GRMZM2G102156
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Variation: September 16th, 2019
Gene Model: September 16th, 2019
4 months agoqpt1 quinolinate phosphoribosyltransferase1: mutant has defective kernel
 
GRMZM5G887647
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Variation: September 16th, 2019
Gene Model: September 16th, 2019
4 months agoIDP602  : similar to Electron transporter, putative (DUF179) of A. thaliana
8.04
GRMZM2G084274
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Variation: March 30th, 2007
Gene Model: August 30th, 2019
4 months agopck2 phosphoenolpyruvate carboxykinase homolog2: syntenic with pck1; leaf cDNA csu145, low copy, similar to yeast phosphoenolpyruvate carboxykinase
9.06
GRMZM5G870932
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: August 7th, 2014
Variation: September 26th, 2014
Gene Model: August 8th, 2014
4 months agoumc1788a  :
7.00
GRMZM2G090824
    Variation: September 1st, 2003
Gene Model: September 8th, 2019
4 months agobk4 brittle stalk4: mutants have a brittle stalk phenotype
7.03
   Jiao, SP et al. 2019. Plant Physiol pp.doi: doi.org/10.1104/pp.19.00615     Reference: September 7th, 2019
Gene Product: September 1st, 2003
Variation: September 7th, 2019
4 months agorf5 restorer of fertility5: dominant Rf5 restores fertility to cms-C; complementary with Rf4 and Rf6
 
   Hu, YM et al. 2006. Theor Appl Genet 113:357-360     Reference: September 7th, 2019
Variation: September 1st, 2003
4 months agorfi1 restorer of Cms-C fertility inhibitor1: inhibitor of the Rf5 restorer
 
   Hu, YM et al. 2006. Theor Appl Genet 113:357-360     Reference: September 7th, 2019
Variation: September 6th, 2019
4 months agodin1 drought-induced protein 19 homolog1: responds to salt stress and may impact the expression of stress-related genes
 
GRMZM2G014066
Zhang, XG et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02467-1     Reference: September 7th, 2019
Gene Product: May 15th, 2019
Gene Model: September 7th, 2019
4 months agoms23 male sterile23: pollen mother cells degeneratedominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.02
GRMZM2G021276
Jaqueth, JS et al. 2019. Plant J pp.doi: 10.1111/tpj.14521     Reference: September 6th, 2019
Gene Product: September 14th, 2016
Variation: September 6th, 2019
Gene Model: December 4th, 2016
4 months agopal1 phenylalanine ammonia lyase homolog1: leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
5.05
   Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Variation: September 24th, 2014
4 months agopal2 phenylalanine ammonia lyase2:
2.04 - 2.04
GRMZM2G441347
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 1st, 2003
Variation: February 21st, 2017
Gene Model: February 21st, 2017
4 months agopal3 phenylalanine ammonia lyase3: used primers on cDNA from glume bars to PCR out RFLP probe. 190 bp ss-mRNA with homology to phenylalanine ammonia lyase. Mapped minor band to this site.
4.05
GRMZM2G160541
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 1st, 2003
Variation: September 25th, 2014
Gene Model: September 19th, 2014
4 months agopal7 phenylalanine ammonia lyase7:
 
GRMZM2G170692
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
4 months agopal9 phenylalanine ammonia lyase9:
 
GRMZM2G029048
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
4 months agopal6 phenylalanine ammonia lyase6:
 
GRMZM2G118345
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
4 months agopal5 phenylalanine ammonia lyase5:
 
GRMZM2G081582
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
4 months agopal4 phenylalanine ammonia lyase4:
 
GRMZM2G063917
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
4 months agopal8 phenylalanine ammonia lyase8:
 
GRMZM2G334660
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 17th, 2016
4 months agopal10 phenylalanine ammonia lyase homolog10:
 
GRMZM2G326335
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: September 6th, 2019
4 months agorfi2 restorer of Cms-S fertility inhibitor2: inhibitor of the Rf9 restorer
 
   Gabay-Laughnan, S et al. 2009. Genetics 182:91-103     Reference: December 21st, 2009
Variation: September 6th, 2019
4 months agospi1 sparse inflorescence1: mutant tassels have fewer branches and spikelets, and its ears are small, with fewer kernels
3.08
GRMZM2G025222
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: September 5th, 2019
Gene Model: April 24th, 2013
Recommended by Lisa Harper:
October 7th, 2008
4 months agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Liu, C et al. 2019. Breed Sci pp.doi: 10.1270/jsbbs.18170     Reference: September 5th, 2019
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
4 months agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
4 months agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
   Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Variation: September 5th, 2019
4 months agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
   Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Variation: September 25th, 2007
4 months agopcap1 plasma membrane-associated cation-binding protein:
5.04
GRMZM2G071089
Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Variation: September 1st, 2003
Gene Model: September 4th, 2019
4 months agoglr1 glutamic acid- and lysine-rich1: Encodes a cell membrane localized microtubule-associated protein, that mediated leaf morphogenesis
3.00
GRMZM2G123558
Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: April 3rd, 2018
4 months agopgip1 polygalacturonase-inhibiting protein1:
 
GRMZM2G333980
Zhu, G et al. 2019. Phytopathology pp.doi: 10.1094/PHYTO-01-19-0008-R     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
4 months agopgip2 polygalacturonase-inhibiting protein2:
 
GRMZM2G121312
Zhu, G et al. 2019. Phytopathology pp.doi: 10.1094/PHYTO-01-19-0008-R     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
4 months agopgip3 polygalacturonase-inhibiting protein3: Over-expression in rice leads to sheath blight resistance
 
GRMZM2G025105
Zhu, G et al. 2019. Phytopathology pp.doi: 10.1094/PHYTO-01-19-0008-R     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
4 months agodrepp2 developmentally regulated plasma membrane polypeptide2:
 
GRMZM2G007151
Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
4 months agoumc1369  :
 
GRMZM2G049269
    Variation: September 1st, 2003
Gene Model: September 3rd, 2019
4 months agocl9362_1  :
8.06
GRMZM2G461793
    Variation: September 25th, 2007
Gene Model: September 3rd, 2019
4 months agoIDP1436  :
8.06
GRMZM5G805585
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP1628  :
8.09
GRMZM2G148881
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP2350  :
8.06
GRMZM2G134256
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP2398  :
8.08
GRMZM2G002858
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP2402  :
8.06
GRMZM2G340319
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP27  :
8.06
GRMZM2G472991
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP387  :
8.08
AC204359.3_FG005
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP706  :
8.08
GRMZM2G124047
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP763  :
8.08
GRMZM2G097032
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoIDP771  :
8.06
GRMZM2G112079
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoumc1121  :
8.05
GRMZM2G128658
    Variation: September 1st, 2003
Gene Model: September 2nd, 2019
4 months agocsu829  :
8.05
GRMZM2G042623
    Variation: September 1st, 2003
Gene Model: September 1st, 2019
4 months agoumc1712  :
8.05
GRMZM2G168590
    Variation: September 1st, 2003
Gene Model: September 1st, 2019
4 months agoIDP2365  :
8.05
GRMZM2G176707
    Variation: March 31st, 2005
Gene Model: September 1st, 2019
4 months agoIDP374  :
8.05
GRMZM2G456835
    Variation: March 31st, 2005
Gene Model: September 1st, 2019
4 months agonrx1 nucleoredoxin1: single copy cDNA sequence; thioredoxin-like
1.04
GRMZM2G048324
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2014
Gene Model: September 11th, 2014
Recommended by Ed Coe:
January 8th, 2008
4 months agopdk2 pyruvate, orthophosphate dikinase2: cytosolic
8.04
GRMZM2G097457
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: July 28th, 2014
Variation: December 19th, 2017
Gene Model: November 21st, 2012
4 months agopgm2 phosphoglucomutase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
5.01
GRMZM2G109383
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 28th, 2011
4 months agoumc1605  : NCBI: ankyrin repeat domain-containing protein 2
1.12
GRMZM5G821637
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Variation: November 18th, 2016
Gene Model: November 18th, 2016
4 months agovq52 VQ motif-transcription factor52: constitutively expressed in maize tissues, and mainly expressed in the leaf; it is located in the nucleus of maize protoplasts; overexpression in Arabidopsis accelerated premature leaf senescence (Yu et al., 2019)
 
GRMZM2G122447
Yu, TT et al. 2019. PLoS One 14:e0221949     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq1 VQ motif-transcription factor1:
 
GRMZM2G417835
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq2 VQ motif-transcription factor2:
 
GRMZM2G420357
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq3 VQ motif-transcription factor3:
 
GRMZM2G318652
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq4 VQ motif-transcription factor4:
 
GRMZM2G128644
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq5 VQ motif-transcription factor5:
 
GRMZM2G174650
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq6 VQ motif-transcription factor6:
 
GRMZM2G158976
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq7 VQ motif-transcription factor7:
 
GRMZM2G421934
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq8 VQ motif-transcription factor8:
 
GRMZM2G420630
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq9 VQ motif-transcription factor9:
 
GRMZM2G059064
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq10 VQ motif-transcription factor10:
 
GRMZM2G118172
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq11 VQ motif-transcription factor11:
 
GRMZM2G174210
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq12 VQ motif-transcription factor12:
 
AC206638.3_FG007
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq13 VQ motif-transcription factor13:
 
GRMZM2G023921
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq14 VQ motif-transcription factor14:
 
GRMZM2G369742
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq15 VQ motif-transcription factor15:
 
GRMZM2G147443
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq16 VQ motif-transcription factor16:
 
GRMZM2G101409
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq17 VQ motif-transcription factor17:
 
GRMZM2G354123
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq18 VQ motif-transcription factor18:
 
GRMZM2G055404
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq19 VQ motif-transcription factor19:
 
GRMZM2G378442
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq20 VQ motif-transcription factor20:
 
GRMZM2G314520
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq21 VQ motif-transcription factor21:
 
AC194056.3_FG008
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq22 VQ motif-transcription factor22:
 
GRMZM2G066599
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq23 VQ motif-transcription factor23:
 
GRMZM2G322950
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq24 VQ motif-transcription factor24:
 
GRMZM2G153597
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq25 VQ motif-transcription factor25:
 
GRMZM2G010333
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq26 VQ motif-transcription factor26:
 
GRMZM2G124290
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq27 VQ motif-transcription factor27:
 
GRMZM2G129140
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq28 VQ motif-transcription factor28:
 
GRMZM2G325208
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq29 VQ motif-transcription factor29:
 
AC207043.3_FG002
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq30 VQ motif-transcription factor30:
 
GRMZM2G346837
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq31 VQ motif-transcription factor31:
 
GRMZM2G061941
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq32 VQ motif-transcription factor32:
 
GRMZM2G003669
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq33 VQ motif-transcription factor33:
 
GRMZM2G420715
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq34 VQ motif-transcription factor34:
 
GRMZM2G082118
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq35 VQ motif-transcription factor35:
 
GRMZM2G099691
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq36 VQ motif-transcription factor36:
 
GRMZM2G174558
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq37 VQ motif-transcription factor37:
 
GRMZM5G814101
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq38 VQ motif-transcription factor38:
 
GRMZM2G355499
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq39 VQ motif-transcription factor39:
 
GRMZM2G083285
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq40 VQ motif-transcription factor40:
 
GRMZM2G126413
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq41 VQ motif-transcription factor41:
 
GRMZM2G316033
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq42 VQ motif-transcription factor42:
 
GRMZM2G151909
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq43 VQ motif-transcription factor43:
 
GRMZM2G036980
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq44 VQ motif-transcription factor44:
 
GRMZM2G180668
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq45 VQ motif-transcription factor45:
 
AC203294.3_FG012
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq46 VQ motif-transcription factor46:
 
GRMZM5G800535
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq47 VQ motif-transcription factor47:
 
GRMZM2G374336
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq48 VQ motif-transcription factor48:
 
GRMZM5G849527
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq49 VQ motif-transcription factor49:
 
GRMZM5G864059
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq50 VQ motif-transcription factor50:
 
GRMZM2G138370
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq51 VQ motif-transcription factor51:
 
GRMZM2G069169
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq53 VQ motif-transcription factor53:
 
GRMZM2G333049
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq54 VQ motif-transcription factor54:
 
GRMZM2G035531
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq55 VQ motif-transcription factor55:
 
GRMZM2G014839
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq56 VQ motif-transcription factor56:
 
GRMZM2G129815
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq57 VQ motif-transcription factor57:
 
GRMZM5G864133
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq58 VQ motif-transcription factor58:
 
GRMZM2G180262
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq59 VQ motif-transcription factor59:
 
GRMZM2G060720
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq60 VQ motif-transcription factor60:
 
GRMZM2G064903
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agovq61 VQ motif-transcription factor61:
 
GRMZM2G475276
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
4 months agoIDP2456  :
8.05
GRMZM2G082792
    Variation: March 31st, 2005
Gene Model: August 31st, 2019
4 months agoumc1302  :
8.03
GRMZM2G062974
    Variation: September 1st, 2003
Gene Model: August 30th, 2019
4 months agoumc1427  :
8.03 - 8.04
GRMZM5G821139
    Variation: September 1st, 2003
Gene Model: August 30th, 2019
4 months agopco077003  :
8.03
GRMZM2G147051
    Variation: September 25th, 2007
Gene Model: August 30th, 2019
4 months agohb1 hemoglobin1: suppression of expression associated with programmed cell death (Huang et al 2014)cDNA sequence; SSR umc1733;cloned hb gene codes for a predicted protein of 164 amino acids
9.06
GRMZM2G067402
Owusu, V et al. 2019. Planta pp.doi: 10.1007/s00425-019-03263-7     Reference: August 29th, 2019
Gene Product: February 20th, 2018
Variation: September 24th, 2010
Gene Model: May 15th, 2014
4 months agoumc1385  :
8.03
AC234185.1_FG004
    Variation: September 1st, 2003
Gene Model: August 28th, 2019
4 months agoAY110113  :
8.03
GRMZM2G053574
    Variation: September 25th, 2007
Gene Model: August 27th, 2019
4 months agogbf1 G-box binding factor1: anoxia induced, nuclear, basic-region leucine zipper protein; low copy number; cDNA clone
6.07
GRMZM2G011932
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: December 7th, 2012
Gene Model: July 27th, 2016
4 months agolip15 low temperature-induced protein15: cDNA cross hybridizing to rice lip19, bZIP protein from rabbit reticulocytes or E. coli binds wheat histone H3 gene promoter; single band in Southerns
6.01
GRMZM2G448607
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: March 14th, 2007
Gene Model: July 28th, 2016
4 months agobzip4 bZIP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: August 21st, 2018
Variation: August 21st, 2018
4 months agoobf1 octopine synthase binding factor1: encodes protein with bZIP motif that binds to transcriptional enhancer sequences (ocs-elements); gene specific probe; map location unclearbzip39 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.05
GRMZM2G479885
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: June 29th, 2012
Gene Model: July 28th, 2016
4 months agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
   Alvarez, CE, et al. 2019. Nature Plants. 0:doi:10.1038/s41477-019-0451-7     Reference: August 26th, 2019
Gene Product: June 27th, 2019
Variation: September 1st, 2003
4 months agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
4 months agobzip129 bZIP-transcription factor 129:
 
GRMZM2G024851
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: August 21st, 2018
Gene Model: August 26th, 2019
4 months agobzip127 bZIP-transcription factor 127: similar to Arabidopsis basic leucine zipper transcription factor-like protein (NCBI)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G175280
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Variation: September 6th, 2017
Gene Model: September 6th, 2017
4 months agoscl1 scarecrow-like1: cDNA sequence
8.03
GRMZM2G023872
Peng, XJ et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02458-2     Reference: August 24th, 2019
Gene Product: June 24th, 2019
Variation: August 26th, 2015
Gene Model: August 26th, 2015
4 months agopco107884  :
9.03
GRMZM2G118019
    Variation: September 25th, 2007
Gene Model: August 23rd, 2019
4 months agobgaf1 beta glucosidase aggregating factor1:
7.02
GRMZM2G172204
Ma, YH et al. 2019. Grassland Sci pp.doi: 10.1111/grs.12246     Reference: August 22nd, 2019
Gene Product: September 1st, 2003
Variation: October 23rd, 2013
Gene Model: October 24th, 2011
4 months agorpl35 60S ribosomal protein L35:
5.04
GRMZM2G043279
Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: August 22nd, 2019
Gene Model: June 19th, 2017
4 months agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Tian, JG, et al. 2019. Science. 365:658-664     Reference: August 22nd, 2019
Gene Product: February 18th, 2012
Variation: August 16th, 2019
Gene Model: February 15th, 2012
4 months agoo*-QCL3024 opaque*-QCL3024: mutant has opaque/high-lysine endosperm
 
   Wang, W et al. 2019. Sci. Rep. 9:12265     Reference: August 22nd, 2019
Variation: February 16th, 2013
4 months agorpl35a 60S ribosomal protein L35a: may be a key gene involved in cold response of maize under low temperature (Ma et al., 2019)
 
   Ma, YH et al. 2019. Grassland Sci pp.doi: 10.1111/grs.12246     Reference: August 22nd, 2019
Gene Product: August 22nd, 2019
5 months agorpo1 RNA polymerase II homolog1: leaf cDNA csu150, similar to yeast RBP2, RNA polymerase
1.08
GRMZM2G113928
Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 18th, 2019
5 months agoago18b argonaute18b: mutant affects length of central tassel branch
1.08
GRMZM2G457370
Sun, W et al. 2019. BMC Genomics pp.doi: 10.1186/s12864-019-6028-z     Reference: August 17th, 2019
Gene Product: August 12th, 2016
Variation: August 17th, 2019
Gene Model: August 12th, 2016
5 months agorca1 RUBISCO activase1: single copy leaf cDNA csu901 smilar to RUBISCO activaseencodes the beta form of RUBISCO activase
4.00
GRMZM2G162282
Zhang, Y et al. 2019. BMC Plant Biology 19:351     Reference: August 16th, 2019
Gene Product: October 28th, 2014
Variation: September 1st, 2003
Gene Model: February 11th, 2014
5 months agohex3 hexokinase3:
8.05
   Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: August 15th, 2019
5 months agoocl5a outer cell layer5a:
4.04 - 4.05
   Gao, LL et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03405-1     Reference: August 12th, 2019
Gene Product: September 1st, 2003
Variation: August 12th, 2019
5 months agoami4 amidase4:
 
GRMZM2G022192
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905     Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 12th, 2019
5 months agoami2 amidase5:
 
GRMZM5G819320
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905     Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 12th, 2019
5 months agoami3 amidase3:
5.07
GRMZM2G159542
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905     Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 12th, 2019
5 months agoami1 amidase1:
 
GRMZM2G169087
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905   AT1G08980 (TAIR) Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 11th, 2019
5 months agoami5 amidase2:
 
GRMZM2G448233
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905   AT1G08980 (TAIR) Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 11th, 2019
5 months agoumc1419  :
2.00 - 2.01
GRMZM2G064202
    Variation: September 1st, 2003
Gene Model: August 10th, 2019
5 months agoacd6 accelerated cell death ortholog6: knockout mutants are more susceptible to Ustilago maydis infection
 
GRMZM2G123977
Zhang, ZQ et al. 2019. Plant Signal Behav pp.doi: 10.1080/15592324.2019.1651604   At4g14400 (TAIR) Reference: August 10th, 2019
Gene Product: August 10th, 2019
Variation: August 10th, 2019
Gene Model: August 10th, 2019
5 months agonfe101 nucleosome/chromatin assembly factor group E (ACF1 homologs) 101:
5.05
GRMZM2G337749
Gendler, K et al. 2008. Nucl Acid Res 36:D298-302     Reference: August 8th, 2019
Variation: September 1st, 2003
Gene Model: August 8th, 2019
5 months agoincw5 invertase cell wall5:
 
GRMZM2G095725
Zhao, HB et al. 2019. Int J Mol Sci 20:3807   LOC_Os04g33740 (MSU/TIGR) Reference: August 7th, 2019
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
5 months agonactf135 NAC-transcription factor 135: confers enhanced sensitivity to ABA and osmotic stress
 
   He, L et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b02331     Reference: August 6th, 2019
Gene Product: July 8th, 2019
5 months agophot1 blue-light receptor phototropin 1: cDNA sequence similar to Arabidopsis NPH1, (GenBank AF039864, AF053941) protein involved in phototropism; SSR umc1062
3.09
   Suzuki, H et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz344     Reference: August 5th, 2019
Gene Product: May 13th, 2014
Variation: May 23rd, 2005
5 months agoc3h48 C3H-transcription factor 348: similar to zinc finger CCCH domain-containing protein 46 of A. thaliana
3.09 - 3.10
GRMZM2G044004
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: August 4th, 2019
5 months agoemp5 empty pericarp5: encodes a mitochondrion-targeted DYW subgroup pentatricopeptide repeat (PPR) protein; mutant has empty pericarp phenotype
 
GRMZM2G060536
Wang, Y et al. 2019. PLoS Genetics 15:e1008305     Reference: August 3rd, 2019
Gene Product: December 27th, 2016
Variation: March 12th, 2013
Gene Model: March 11th, 2013
5 months agoemp21 empty pericarp21:
 
GRMZM5G849971
Wang, Y et al. 2019. PLoS Genetics 15:e1008305     Reference: August 3rd, 2019
Gene Product: December 27th, 2016
Variation: August 3rd, 2019
Gene Model: August 3rd, 2019
5 months agoIDP2554  :
9.07
GRMZM2G169384
Wang, Y et al. 2019. PLoS Genetics 15:e1008305     Reference: August 3rd, 2019
Variation: March 31st, 2005
Gene Model: January 24th, 2019
5 months agoserk2 somatic embryogenesis receptor-like kinase2: a single copy DNA with homology to carrot and Arabidopsis SERK genes;SSR umc2304
5.05
   Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT1G71830 (TAIR)
LOC_Os04g38480 (MSU/TIGR)
Reference: August 1st, 2019
Gene Product: September 1st, 2003
Variation: June 11th, 2015
Recommended by Ed Coe:
January 8th, 2008
5 months agodek5 defective kernel5: shrunken endosperm; white seedling with green stripes
3.02
GRMZM2G083374
Zhang, JY, et al. 2019. J Cell Biol. 0:doi: 10.1083/jcb.201807166.     Reference: August 1st, 2019
Gene Product: June 28th, 2019
Variation: June 27th, 2019
Gene Model: June 27th, 2019
5 months agolgn1 liguleless narrow1: Mutant leaves are narrow and branching in the inflorescence is reduced.
 
GRMZM2G134382
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840     Reference: August 1st, 2019
Gene Product: July 10th, 2019
Variation: January 15th, 2016
Gene Model: January 3rd, 2013
5 months agoepr4 endochitinase precursor4: involved in inducing pathogen defenses and suppressing herbivore defenses
 
GRMZM2G129189
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840     Reference: August 1st, 2019
Variation: July 14th, 2016
Gene Model: July 14th, 2016
5 months agosol1 sympathy for the ligule1: Mo17-contributed allele suppressed Lgn1-R mutant phenotypes
1.04 - 1.04
GRMZM2G075262
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT5G05190 (TAIR) Reference: August 1st, 2019
Gene Product: June 21st, 2019
Variation: June 21st, 2019
Gene Model: October 16th, 2017
5 months agobsu1 brassinosteroid insensitive suppressor protein1:
 
GRMZM2G028700
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT1G08420 (TAIR) Reference: August 1st, 2019
Gene Product: September 1st, 2003
Gene Model: June 21st, 2019
5 months agomkp1 MAP kinase phosphatase1:
 
GRMZM2G005350
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT3G55270 (TAIR) Reference: August 1st, 2019
Gene Product: June 21st, 2019
Gene Model: June 21st, 2019
5 months agosmk9 small kernel9: mutants exhibit delayed endosperm and embryo development
 
GRMZM2G420723
Pan, ZY et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110205     Reference: July 30th, 2019
Gene Product: December 27th, 2016
Variation: July 30th, 2019
Gene Model: July 30th, 2019
5 months agoppr405 pentatricopeptide repeat protein405: mutants exhibit embryo lethality and albinism
7.04
GRMZM2G158452
Yuan, NN et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110203     Reference: July 29th, 2019
Gene Product: December 27th, 2016
Variation: July 29th, 2019
Gene Model: July 29th, 2019
5 months agolaz1 lazarus ortholog1: functions as a transmembrane organic solute transporter (Liu et al., 2019)
7.03
GRMZM2G025242
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: September 10th, 2018
5 months agoexpb4 beta expansin4:
7.02
GRMZM2G154178
Wu, GX et al. 2019. Plant Physiol pp.doi; 10.1104/pp.19.00239     Reference: July 27th, 2019
Variation: May 31st, 2010
Gene Model: March 2nd, 2016
5 months agolaz2 lazarus ortholog2: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G498656
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz3 lazarus ortholog3: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G122045
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz4 lazarus ortholog4: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G100419
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz5 lazarus ortholog5: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G035445
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz6 lazarus ortholog6: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G071688
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz7 lazarus ortholog7: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G078238
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz8 lazarus ortholog8: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G373717
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agolaz9 lazarus ortholog9: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G082181
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
5 months agoago18a argonaute18a:
2.07
   Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
5 months agoago108 argonaute108:
5.01
GRMZM2G461936
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Variation: September 11th, 2007
Gene Model: August 13th, 2016
5 months agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
GRMZM5G852170
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
5 months agoago1d argonaute1d: Ortholog of Arabidopsis ago1
 
GRMZM2G361518
Zhai, LH et al. 2019. Hereditas 156:27   AT1G48410 (TAIR) Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
5 months agoago1a argonaute1a: Ortholog of Arabidopsis ago1
 
GRMZM2G441583
Zhai, LH et al. 2019. Hereditas 156:27   AT1G48410 (TAIR) Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
5 months agoago2b argonaute2b:
 
GRMZM2G354867
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
5 months agoago4a argonaute4a:
 
GRMZM2G589579
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
5 months agoago5b argonaute5b:
 
GRMZM2G059033
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
5 months agoago5c argonaute5c:
 
GRMZM2G123063
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
5 months agoxa21 Xanthomonas oryzae pv. oryzae resistance ortholog21: transgenic rice showed enhanced resistance to bacterial blight
 
GRMZM2G389948
Gao, Y et al. 2019. Physiol Mol Plant Pathol 108:101429   LOC_Os11g29790 (MSU/TIGR)
Os11g0559200 (Gramene)
Reference: July 26th, 2019
Gene Product: July 10th, 2019
Gene Model: July 26th, 2019
5 months agoprh4 protein phosphatase homolog4:
 
GRMZM2G166297
He, ZH et al. 2019. Int J Mol Sci 20:E3573     Reference: July 25th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agosmk4 small kernel4: exclusively localized in mitochondria; mutant abolishes C-to-U editing at position 1489 of the cytochrome c oxidase1 (cox1) transcript, causing an amino acid change from serine to proline at 497
 
GRMZM2G459532
Wang, H-C et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12856     Reference: July 24th, 2019
Gene Product: December 27th, 2016
Variation: July 24th, 2019
Gene Model: July 24th, 2019
6 months agopza02421  :
4.08
   Bishop, EH et al. 2019. Genomics pp.doi: 10.1016/j.ygeno.2019.07.009     Reference: July 19th, 2019
Gene Product: November 11th, 2017
Variation: September 25th, 2007
6 months agogras10 GRAS-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.06
GRMZM2G110579
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 19th, 2019
Gene Model: July 19th, 2019
6 months agobaf1 barren stalk fastigiate1: ear shoots often absent, or distorted and fused to culm at base; tassel branches erect, bundled, fused to culm at base
9.02
GRMZM2G072274
Bishop, EH et al. 2019. Genomics pp.doi: 10.1016/j.ygeno.2019.07.009   LOC_Os06g04540 (MSU/TIGR)
Os06g0136900 (Gramene)
Reference: July 19th, 2019
Gene Product: November 11th, 2017
Variation: August 15th, 2011
Gene Model: December 8th, 2014
6 months agoIDP665  :
9.04
AC225193.3_FG003
Bishop, EH et al. 2019. Genomics pp.doi: 10.1016/j.ygeno.2019.07.009     Reference: July 19th, 2019
Variation: March 31st, 2005
Gene Model: January 22nd, 2019
6 months agophd13 PHD-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.05
GRMZM2G059266
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 18th, 2019
6 months agobnlg1160  :
3.06
GRMZM2G071705
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Variation: September 1st, 2003
Gene Model: March 21st, 2018
6 months agoumc1323  : NCBI: F-box/LRR-repeat protein 17-like
1.05
GRMZM2G100121
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Variation: October 18th, 2016
Gene Model: October 20th, 2016
6 months agotubtf6 TUB-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Gene Product: September 29th, 2015
6 months agocyc9 cyclin9:
 
GRMZM2G017081
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Gene Product: June 26th, 2009
Variation: June 6th, 2016
Gene Model: June 6th, 2016
6 months agotubtf9 TUB-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.06
GRMZM2G115701
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Gene Product: September 29th, 2015
Gene Model: September 29th, 2015
6 months agopgh1 polygalacturonase gene homolog1: functions as a suppressor of programmed cell death induced by at least two autoactive NLR proteins and by two chemical inducers
 
GRMZM2G135763
He, YJ et al. 2019. BMC Plant Biology 19:310     Reference: July 15th, 2019
Gene Product: September 1st, 2003
Variation: July 15th, 2019
Gene Model: July 15th, 2019
6 months agobnlg1740  : similar to Arabidopsis Cytochrome b561/ferric reductase transmembrane protein family
6.07
GRMZM2G023133
Chaikam, V et al. 2019. Euphytica 215:138     Reference: July 13th, 2019
Variation: September 1st, 2003
Gene Model: August 29th, 2018
6 months agomthr1 methionine synthase homolog1: leaf cDNA csu194 similar to E. coli metE
5.02
GRMZM2G112149
Chaikam, V et al. 2019. Euphytica 215:138     Reference: July 13th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2018
6 months agomrpa4 multidrug resistance-associated protein 4: Is apparently the locus for which the lpa1-1 mutant leison is located
1.01
GRMZM5G820122
Borlini, G et al. 2019. Plants 8: E209     Reference: July 11th, 2019
Gene Product: July 11th, 2019
Variation: July 12th, 2019
Gene Model: October 17th, 2016
6 months agomrpa10 multidrug resistance protein associated10:
 
AC234203.1_FG004
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Gene Model: July 12th, 2019
6 months agomrpa1 multidrug resistance protein associated1: ATP-binding cassette (ABC) transporter
2.09
GRMZM2G113203
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: July 11th, 2019
Variation: July 30th, 2013
Gene Model: February 6th, 2015
6 months agomrpa2 multidrug resistance associated protein2: ATP-binding cassette (ABC) transporter
7.02
GRMZM5G832772
Swarbreck, D; Ripoll, P-J; Brown, DA; Edwards, K; Theodoulou, F. 2003. Gene. 315:153-164     Reference: November 6th, 2009
Gene Product: July 11th, 2019
Variation: January 12th, 2016
Gene Model: January 12th, 2016
6 months agomrpa3 multidrug resistance-associated protein3: Transport of anthocyanin into vacuole
9.02
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: July 11th, 2019
Variation: November 11th, 2009
6 months agomrpa5 multidrug resistance-associated protein5:
 
GRMZM2G084181
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Variation: May 14th, 2011
Gene Model: October 2nd, 2018
6 months agomrpa6 multidrug resistance associated protein6:
 
GRMZM2G142870
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Gene Model: January 12th, 2016
6 months agomrpa7 multidrug resistance associated protein7:
 
GRMZM5G830695
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Variation: May 14th, 2011
Gene Model: January 12th, 2016
6 months agomrpa8 multidrug resistance associated protein8:
 
   Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
6 months agomrpa9 multidrug resistance associated protein9:
 
GRMZM2G365957
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Gene Model: July 11th, 2019
6 months agoglk58 G2-like-transcription factor 58:
6.06
GRMZM2G117854
Li, JB et al. 2019. Genet Resour Crop Evol pp.doi: 10.1007/s10722-019-00805-6     Reference: July 11th, 2019
Gene Product: July 25th, 2017
Variation: July 11th, 2019
Gene Model: February 2nd, 2018
6 months agoptk5 receptor-like kinase4:
8.02
GRMZM2G473511
Feuillet, C. 1999. Proc Natl Acad Sci, USA 96: 8265-8270     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Gene Model: July 1st, 2015
Recommended by Ed Coe:
January 25th, 2007
6 months agosrk1 S-receptor kinase1: single copy leaf cDNA, csu811, similar to S-receptor kinase of Brassica; locus is absent from inbred GT119
2.09
AC217293.3_FG007
Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: July 10th, 2019
Variation: September 1st, 2003
Gene Model: July 1st, 2015
6 months agoarodh3 arogenate dehydrogenase3: mutants have retarded vegetative growth and opaque endosperm
6.01
   Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: July 7th, 2018
Variation: July 7th, 2018
6 months agofae2 fatty acid elongase2:
9.03
   Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Variation: January 9th, 2019
6 months agoer3 erecta-like3: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
9.03
   Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
6 months agogl2 glossy2: like gl1, but surface wax is all rice-grain-type particles
2.02
   Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: December 7th, 2012
6 months agoltk1 leucine-rich transmembrane protein kinase1: endosperm cDNA, multiple copy; one copy is near pds1
1.02
GRMZM2G153393
Li, Z et al. 1997. Maize Genetics Conference Abstracts 39     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Variation: September 1st, 2003
Gene Model: July 28th, 2016
6 months agoptk3 receptor-like protein kinase3: mature pollen-specific cDNA, single copy, like tomato and Arabidopsis genes
1.06
GRMZM2G151216
Kim, HY et al. 2002. Plant Mol Biol 50:1-16     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Gene Model: July 11th, 2013
6 months agocdj3 chaperone DNA J3: NCBI: putative dnaJ chaperone family protein
5.03
GRMZM2G134980
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: March 24th, 2017
Gene Model: March 24th, 2017
6 months agoald1 aldolase1: cytosolic aldolase; cDNA and genomic clones; Southern blots give single or double band; promoter functional in transient expression assay
8.06
GRMZM2G057823
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Variation: September 16th, 2013
Gene Model: September 15th, 2013
6 months agoumc1444  :
6.01
GRMZM2G473788
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: September 1st, 2003
Gene Model: August 20th, 2018
6 months agoumc1608  :
3.04
GRMZM5G871336
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
6 months agofarl6 FAR1-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: June 28th, 2019
6 months agobzip89 bZIP-transcription factor 89: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G158313
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: September 1st, 2003
Gene Model: June 28th, 2018
6 months agoptk1 protein kinase1: cDNA, genomic clones homologous to serine/threonine protein kinases (one domain) and to Brassica self-incompatibility locus glycoprotein (a second domain)
6.05
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: July 10th, 2019
Variation: February 13th, 2008
6 months agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Yang, P et al. 2018. New Phytol pp.doi: 10.1111/nph.15419   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: September 5th, 2018
Gene Product: July 10th, 2019
Variation: July 14th, 2015
Gene Model: July 1st, 2015
6 months agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
   Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: July 10th, 2019
Variation: February 11th, 2013
6 months agofea3 fasciated ear3: ear tip broad and branched, typically splitting and showing ring fasciation to form a hollow ear.
 
GRMZM2G166524
Strable, J; Scanlon, MJ. 2016. Nature Genetics. 48:704-5   At3g25670 (TAIR)
LOC_Os01g02060 (MSU/TIGR)
Reference: June 2nd, 2019
Gene Product: July 10th, 2019
Variation: May 18th, 2016
Gene Model: May 18th, 2016
6 months agocps5 chloroplast protein synthesis5: NCBI: putative leucine--tRNA ligase, mitochondrialChloroplast protein synthesis 5: chloroplast leucyl-tRNA synthetase (A. Barkan, 2015)
8.02
GRMZM2G566786
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 12th, 2017
6 months agophyA1 phytochromeA1: red/far red light signal receptor; major phytochrome A transcript in seedling leaf blade, sheath and mesocotyl under dark light conditions; is greatly reduced in white or red light. See also phyA2, phyB1, phyB2, phyC1, phyC2.
1.10
GRMZM2G157727
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: June 30th, 2009
Variation: September 25th, 2007
Gene Model: August 13th, 2014
6 months agowrky98 WRKY-transcription factor 98: NCBI: probable WRKY transcription factor 12 (similarity to Arabidpsis gene)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.06
GRMZM2G377217
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: July 24th, 2017
Variation: March 15th, 2017
Gene Model: March 15th, 2017
6 months agoltk2 leucine-rich transmembrane protein kinase2: belongs to a small gene family; ltk2 shares 98.6% nucleotide sequence homology with ltk3, and these genes could be products of a recent gene duplication located on chromosome 9L.
9.07
GRMZM2G330907
Li, ZH and Wurtzel, E. 1998. Plant Mol Biol 37:749-761     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Variation: January 10th, 2013
Gene Model: December 27th, 2016
6 months agoAI855190  :
1.05
GRMZM2G443525
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: July 29th, 2004
Gene Model: June 6th, 2017
6 months agomkkk27 MAP kinase kinase kinase27: function inferred from sequence similarity (Kong et al 2013)
2.08
GRMZM2G089159
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
6 months agosln1 sister of liguleless narrow1: A paralog of the lgn1 gene
 
GRMZM2G009506
Moon, J; Candela, H; Hake, S. 2013. Development. 140:405-412     Reference: January 30th, 2013
Gene Product: July 10th, 2019
Gene Model: January 3rd, 2013
6 months agobub1 budding inhibited by benzimidazoles homolog1:
 
GRMZM2G105750
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: May 13th, 2014
Variation: January 16th, 2017
Gene Model: January 15th, 2017
6 months agosirk1 sucrose-induced receptor kinase1: expression is altered in response to drought stress
 
GRMZM2G161664
Aquino, B et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.00852   AT5G10020 (TAIR) Reference: June 14th, 2017
Gene Product: July 10th, 2019
Gene Model: June 13th, 2017
6 months agopspb1 photosystem II oxygen evolving polypeptide1: sequence similar to OEC23 photosystem II polypeptide; located by Huang et al 2013 to thylakoid peripheral on lumen side
 
GRMZM2G016677
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
6 months agorlk1 receptor-like protein kinase1: encodes an S-locus receptor-like protein kinase;
 
GRMZM2G099324
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 10th, 2019
Variation: July 25th, 2017
Gene Model: July 25th, 2017
6 months agomsp1 multiple sporocyte1: A conserved ligand-receptor pair with mac1
 
GRMZM2G447447
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: January 8th, 2019
Gene Product: July 10th, 2019
Gene Model: February 17th, 2018
6 months agomsp2 multiple sporocyte2: A conserved ligand-receptor pair with mac1
 
GRMZM2G306771
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: July 10th, 2019
Gene Model: February 17th, 2018
6 months agomsp3 multiple sporocyte3: A conserved ligand-receptor pair with mac1
 
GRMZM2G107484
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: July 10th, 2019
Gene Model: February 17th, 2018
6 months agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
GRMZM2G032132
Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   AT5G13290 (TAIR) Reference: February 7th, 2019
Gene Product: July 10th, 2019
Gene Model: May 21st, 2018
6 months agoer1 erecta-like1: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G463904
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
6 months agoepf1 epidermal patterning factor-like1: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G177393
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
6 months agoepf2 epidermal patterning factor-like2: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G431783
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
6 months agotmm1 too many mouths-like1: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G011401
Caine, RS et al. 2016. Development 143:3306-3314   AT1G80080 (TAIR) Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
6 months agoer4 erecta-like4: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G364977
    Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
6 months agoer2 erecta-like2: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
6.05
GRMZM5G809695
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
6 months agorop5 Rho-related protein from plants 5:
9.01
GRMZM2G102946
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: April 1st, 2004
Gene Model: January 1st, 2015
6 months agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
   Zhang, J et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13139     Reference: May 4th, 2019
Gene Product: July 8th, 2019
Variation: May 4th, 2019
6 months agonactf129 NAC-transcription factor 129: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G027309
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
Gene Model: July 2nd, 2019
6 months agonactf132 NAC-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Estermann, MA et al. 2017. Mol Breed 37:12     Reference: March 3rd, 2017
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
6 months agonactf25 NAC-transcription factor 25: Lines with a MITE insert in the promotor region are more sensitive to drought than those lacking this MITE insert.
 
   Mao, H et al. 2015. Nature Communications 6: 8326   LOC_Os11g03300 (MSU/TIGR) Reference: October 29th, 2015
Gene Product: July 8th, 2019
Variation: September 22nd, 2015
6 months agonactf46 NAC-transcription factor 46: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
6 months agonactf49 NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Estermann, MA et al. 2017. Mol Breed 37:12     Reference: March 3rd, 2017
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
6 months agonactf6 NAC-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to protein ATAF2 of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
6 months agonactf60 NAC-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
6 months agonactf69 NAC-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G027309
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
Gene Model: July 6th, 2019
6 months agonactf8 NAC-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
6 months agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: July 8th, 2019
Variation: September 30th, 2018
6 months agonactf99 NAC-transcription factor 99: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G078954
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
Gene Model: May 28th, 2019
6 months agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: June 22nd, 2016
Gene Product: July 8th, 2019
Variation: October 10th, 2018
Gene Model: November 15th, 2017
6 months agoZm00001d037315  : merges v3 gene models GRMZM2G078954 (nactf129), GRMZM2G379608 (nactf69), GRMZM2G086768 (nactf8) and GRMZM2G027309 (nactf99). These were identified as separate transcription factor family genes by the GRASSIUS project (Yilmaz et al 2009)
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
6 months agoso1 sulfite oxidase1:
1.06
GRMZM2G114739
Xu, ZW et al. 2019. Int J Mol Sci 20:3326     Reference: July 6th, 2019
Gene Product: April 16th, 2013
Gene Model: April 16th, 2013
6 months agotms5 thermosensitive male-sterile5: mutants were fertile at 24C, but male sterile at 32C; exhibit fertility transition at 28C
4.01
GRMZM2G147727
Hu, JC et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12849   LOC_Os02g12290 (MSU/TIGR)
Os02g0214300 (Gramene)
Reference: July 6th, 2019
Variation: February 24th, 2017
Gene Model: February 24th, 2017
6 months agosid1 sister of indeterminate spikelet1: inflorescence architecture, apparent target of tasselseed4 microRNA (Chuck et al 2008),
 
GRMZM2G176175
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: July 5th, 2019
Variation: October 17th, 2014
Gene Model: October 16th, 2014
Recommended by Lisa Harper:
September 2nd, 2008
6 months agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
6 months agosbp9 SBP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agocts1 citrate synthase1: leaf cDNA csu324
5.04
GRMZM2G063851
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: July 5th, 2019
Variation: June 10th, 2014
Gene Model: June 10th, 2014
6 months agosbp28 SBP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G058588
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: January 16th, 2018
6 months agosbp6 SBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.00
GRMZM2G138421
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: June 14th, 2018
6 months agosbp16 SBP-transcription factor16: NCBI: squamosa promoter-binding-like protein 15 Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G169270
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: October 29th, 2016
6 months agonot1 neighbor of tga1: compared to tga1, expressed much higher in maize than teosinte; INDEL probe (Preston et al 2011)
 
AC233751.1_FG002
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
6 months agosbp2 SBP-domain protein2: cDNA sequence; SSR's umc1573, umc1574, umc1623
4.09
GRMZM2G168229
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: December 18th, 2014
6 months agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
GRMZM2G101499
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: December 18th, 2014
6 months agosbp4 SBP-domain protein4: cDNA sequence includes SSR's umc1571 and umc1570
9.03
   Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: July 5th, 2019
Variation: September 1st, 2003
6 months agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
GRMZM2G307588
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: October 6th, 2011
6 months agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
GRMZM2G111136
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: December 18th, 2014
6 months agosbp11 SBP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp13 SBP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp17 SBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp20 SBP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: February 22nd, 2018
6 months agosbp21 SBP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144   AT1G27370 (TAIR) Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp23 SBP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp24 SBP-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp25 SBP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp27 SBP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: December 17th, 2014
6 months agosbp31 SBP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp4 (GRASSIUS) SBP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 5th, 2019
6 months agosbp5 SBP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
6 months agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: June 11th, 2018
6 months agosbp12 SBP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G126827
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: June 27th, 2018
6 months agocts2 citrate synthase2: Tandem duplication 27kb downstream of cts3 based on CornCyc
4.09
GRMZM2G064023
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: July 5th, 2019
Gene Model: April 27th, 2018
6 months agocts5 citrate synthase5: methylation variation in promoter observed depending on the conditions of the light regime (Eprintsev et al., 2019)
3.05
GRMZM2G034083
Eprintsev, AT et al. 2019. Russ J Plant Physiol 66:259-264     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: July 5th, 2019
6 months agodwil1 dwarf & irregular leaf1: mutant plants have shorter internodes, shorter, wider and wrinkled leaves, as well as smaller leaf angle
 
GRMZM2G013657
Jiang, F et al. 2012. PLoS One 7:e37040     Reference: March 12th, 2013
Gene Product: July 5th, 2019
Variation: March 18th, 2013
Gene Model: March 12th, 2013
6 months agosbp19 SBP-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G163813
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: July 11th, 2018
6 months agocts3 citrate synthase3: Tandem duplication 27kb upstream of cts2 based on CornCyc
 
GRMZM2G063909
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: July 5th, 2019
Gene Model: April 27th, 2018
6 months agocts4 citrate synthase4:
 
GRMZM2G135588
    Gene Product: July 5th, 2019
Gene Model: April 27th, 2018
6 months agosbp29 SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G067624
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: July 11th, 2018
6 months agoptf1 Pi starvation-induced transcription factor1: single copy, may be involved in regulating carbohydrate metabolism
9.01 - 9.02
GRMZM2G024530
Li, ZX et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz307   LOC_Os02g35660 (MSU/TIGR)
Os02g0564700 (Gramene)
Reference: July 3rd, 2019
Gene Product: September 14th, 2016
Variation: April 23rd, 2011
Gene Model: April 19th, 2011
Recommended by Maria Katherine Mejia-Guerra:
April 18th, 2011
6 months agoz1A-3 alpha zein 19kDa A-3:
 
GRMZM2G059620
Vicuna Requesens, D et al. 2019. Transgenic Research pp.doi: 10.1007/s11248-019-00162-1     Reference: July 3rd, 2019
Gene Product: September 1st, 2003
Gene Model: July 3rd, 2019
6 months agopprsmr1 pentatricopeptide repeat smr1: mutants have empty pericarp
2.02
   Chen, ZL et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz305   AT1G79490 (TAIR) Reference: July 1st, 2019
Gene Product: December 27th, 2016
Variation: July 1st, 2019
6 months agorboh4 respiratory burst oxidase4:
4.08
GRMZM2G441541
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Variation: September 1st, 2003
Gene Model: July 2nd, 2013
6 months agorboh1 respiratory burst oxidase1: mutant displays defects in root hair initiation and elongation manifested by a reduced density and length of root hairs.
3.06
GRMZM2G426953
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Variation: June 7th, 2014
Gene Model: July 2nd, 2013
6 months agomcsf1 mitochondrial CAF-like splicing factor1: mutants have empty pericarp
 
GRMZM2G087395
Chen, ZL et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz305     Reference: July 1st, 2019
Gene Product: July 23rd, 2009
Variation: July 1st, 2019
Gene Model: July 1st, 2019
6 months agorboh2 respiratory burst oxidase2:
3.07
GRMZM2G138152
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
6 months agod5 dwarf plant5: like d1
2.02
   Best, NB et al. 2017. Plant Direct doi: 10.1002/pld3.9     Reference: June 28th, 2019
Gene Product: September 1st, 2003
Variation: December 3rd, 2015
6 months agofarl1 FAR1-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl10 FAR1-like-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl11 FAR1-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl12 FAR1-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl13 FAR1-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl14 FAR1-like-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl15 FAR1-like-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl2 FAR1-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl3 FAR1-like-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl5 FAR1-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl7 FAR1-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl8 FAR1-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agofarl9 FAR1-like-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
6 months agome1 NADP malic enzyme1: coleoptilar, electrophoretic mobility; null allele is known; tetrameric
3.04 - 3.07
   Goodman, MM et al. 1980. Genetics 96:697-710     Reference: September 1st, 2003
Gene Product: June 27th, 2019
6 months agots5 tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base
4.03 - 4.05
GRMZM2G177668
Lunde, C; Kimberlin, A; Leiboff, S; Koo, AJ; Hake, S. 2019. Communications Biology 2:114     Reference: June 27th, 2019
Gene Product: March 25th, 2019
Variation: March 25th, 2019
Gene Model: March 25th, 2019
6 months agome5 malic enzyme5:
6.05
GRMZM5G886257
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: June 27th, 2019
Variation: August 16th, 2011
Gene Model: August 27th, 2018
6 months agome6 NADP-dependent malic enzyme6:
3.07
GRMZM2G159724
Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: June 27th, 2019
Variation: August 16th, 2011
Gene Model: August 21st, 2014
6 months agome7 malic enzyme7:
 
       Gene Product: June 27th, 2019
6 months agocyp27 cytochrome P-450 27: close paralog to ts5 (Lunde et al., 2019)
 
GRMZM2G164074
Lunde, C; Kimberlin, A; Leiboff, S; Koo, AJ; Hake, S. 2019. Communications Biology 2:114     Reference: June 27th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agome4 malic enzyme4: Embryo and root specific; cytosolic
 
GRMZM2G118770
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: June 27th, 2019
Variation: October 15th, 2010
Gene Model: August 21st, 2014
6 months agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
6 months agodek10 defective kernel10: collapsed endosperm; lethal; cultured embryos green, curled, stubby; encodes a E-subgroup PPR protein
4.06 - 4.11
GRMZM2G087226
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: December 27th, 2016
Variation: February 20th, 2017
Gene Model: February 20th, 2017
6 months agoglu1 beta glucosidase1: electrophoretic mobility; plastidic; dimeric; intralocus hybrid bands occur
10.03
   Czjzek, M et al. 2000. Proc Natl Acad Sci, USA 97:13555-13560     Reference: October 25th, 2011
Gene Product: June 26th, 2019
Variation: January 9th, 2010
6 months agomir3 maize insect resistance3: apoplastic; pest defense protease
 
GRMZM2G166281
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: May 23rd, 2019
Variation: August 1st, 2011
Gene Model: February 12th, 2014
6 months agoincw4 invertase cell wall4: genomic sequence (Genbank)similar to Arabidopsis beta-fructofuranosidase, insoluble isoenzyme CWINV3
2.01
GRMZM2G119941
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: June 12th, 2018
Variation: May 23rd, 2005
Gene Model: May 27th, 2015
6 months agoglu4 beta-glucosidase4:
8.06
AC155376.2_FG005
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930   AT5G36890 (TAIR)
LOC_Os01g67220 (MSU/TIGR)
Reference: June 26th, 2019
Gene Product: June 26th, 2019
Gene Model: September 24th, 2018
6 months agogst41 glutathione transferase41:
6.05
GRMZM2G097989
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2010
Gene Model: July 27th, 2016
6 months agodof2 DNA binding with one finger2: cDNA sequence, Southern blots indicate small gene family; transcriptional repressor
2.07
   Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 months agoglu2 beta-glucosidase2: cDNA produces higher activity in transgenic tobacco; shares 20 amino acids with an N-terminal sequence reported for membrane-bound beta-glucosidase
2.04
   Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: June 26th, 2019
Variation: April 16th, 2013
6 months agonta1 N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related
9.08
GRMZM2G110258
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930   At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR)
Reference: June 26th, 2019
Variation: April 21st, 2017
Gene Model: April 21st, 2017
6 months agomlg3 lea protein group3: cDNA similar to wheat Ec; SSR phi070
6.07
   Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 months agoglu3 beta-glucosidase3:
 
GRMZM2G014844
    Gene Product: June 26th, 2019
Gene Model: January 24th, 2015
6 months agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
6 months agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: June 26th, 2019
Variation: July 17th, 2015
Gene Model: July 16th, 2015
6 months agosweet1b sugars will eventually be exported transporter1b: encodes a functional glucose transporter expressed in subsidiary cells; mutants result in reduced stomatal opening
 
GRMZM2G153358
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: November 4th, 2015
Variation: April 19th, 2019
Gene Model: November 3rd, 2015
6 months agoIDP694  : similar to B12D protein of A. thaliana
9.00
GRMZM2G027392
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Variation: March 31st, 2005
Gene Model: January 22nd, 2019
6 months agobbx6 b-box6:
 
GRMZM2G422644
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
6 months agochr101 chromatin complex subunit A 101: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
2.10
   Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Variation: June 9th, 2018
6 months agogras58 GRAS-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Kranz anatomy; SHR/SCR signaling
 
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: June 24th, 2019
Variation: April 9th, 2014
6 months agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
6 months agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
6 months agochr106 chromatin complex subunit A 106: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
1.10
GRMZM2G071025
Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
6 months agolimtf11 LIM-transcription factor 11: Orthologous to Arabidopsis DA1
 
GRMZM2G017845
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: October 10th, 2012
6 months agogras50 GRAS domain family50: Probe p-cdo344a (rga) is an oat leaf cDNA. Mapped major band to this site.similar to Arabidopsis scarecrow-like protein 30
3.04
GRMZM2G159475
Gray, J et al. 2009. Plant Physiol 149:4-6     Reference: May 6th, 2013
Gene Product: June 24th, 2019
Gene Model: April 9th, 2013
6 months agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Xu, GH et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00111     Reference: June 22nd, 2019
Gene Product: June 20th, 2018
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
6 months agofht1 flavanone 3-hydroxylase1: (aka f3h) single copy cDNA similar to Antirrhinum homologsimilar to Naringenin,2-oxoglutarate 3-dioxygenase of A. thaliana
2.01 - 2.02
   Xu, GH et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00111     Reference: June 22nd, 2019
Gene Product: June 8th, 2012
Variation: September 1st, 2003
6 months agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Xu, GH et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00111     Reference: June 22nd, 2019
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
7 months agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
GRMZM2G042443
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
7 months agodcl4 dicer-like4: (was rgd*-N766B) like rgd1
1.09
GRMZM2G050869
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: July 27th, 2015
Gene Model: July 27th, 2015
7 months agodcl104 dicer-like 104:
 
GRMZM5G814985
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: January 29th, 2015
Gene Model: January 29th, 2015
7 months agodcl105 dicer-like 105:
 
GRMZM2G301405
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: January 29th, 2015
Gene Model: January 29th, 2015
7 months agordr6 RNA-dependent RNA polymerase6: mutant seedlings with reduced fully abaxialized organs that arrest shortly after germination
 
GRMZM2G082437
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Variation: July 29th, 2015
Gene Model: July 27th, 2015
7 months agoago1b argonaute1b: Ortholog of Arabidopsis ago1
 
AC209206.3_FG011
Zhang, ZH et al. 2019. Plants 8:E170   AT1G48410 (TAIR) Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
7 months agoago1c argonaute1c: Ortholog of Arabidopsis ago1
 
GRMZM2G039455
Zhang, ZH et al. 2019. Plants 8:E170   AT1G48410 (TAIR) Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
7 months agoago2a argonaute2a:
 
GRMZM2G007791
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
7 months agoago6 argonaute6:
 
GRMZM2G347402
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
7 months agoago10b argonaute10b:
 
GRMZM2G079080
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
7 months agordr1 RNA-dependent RNA polymerase1:
 
GRMZM2G109787
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Gene Model: June 20th, 2019
7 months agordr2 RNA-dependent RNA polymerase2:
 
GRMZM2G357825
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Gene Model: June 20th, 2019
7 months agordr3 RNA-dependent RNA polymerase3:
 
GRMZM2G347931
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Gene Model: June 20th, 2019
7 months agoago101 argonaute101:
9.03
AC189879.3_FG003
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Variation: September 11th, 2007
Gene Model: January 30th, 2015
7 months agoago104 argonaute104:
6.07
GRMZM2G141818
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Variation: September 4th, 2013
Gene Model: March 31st, 2011
7 months agodcl101 dicer-like 101: mutant plants have 'fuzzy tassel' and reduced stature.
1.01
GRMZM2G040762
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: December 4th, 2014
Gene Model: November 12th, 2014
7 months agodcl102 dicer-like 102:
1.07
GRMZM2G413853
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: September 11th, 2007
Gene Model: January 29th, 2015
7 months agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
GRMZM2G171702
Li, ZX et al. 2019. Plant Signal Behav 17:1-5     Reference: June 19th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
7 months agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Li, ZX et al. 2019. Plant Signal Behav 17:1-5     Reference: June 19th, 2019
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
7 months agomybr96 MYB-related-transcription factor 96: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
   Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: September 25th, 2007
7 months agoremo4 remorin4:
7.04
GRMZM2G081949
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: September 1st, 2003
Gene Model: September 11th, 2018
7 months agoiaa4 Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G159285
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: November 15th, 2016
Gene Model: November 15th, 2016
7 months agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
7 months agophyA2 phytochromeA2: red/far red light signal receptor; minor phytochrome A trancript in dark grown seedling leaf blade, sheath, mesocotyl. See also phyA1, phyB1, phyB2, phyC1, phyC2
5.01
GRMZM2G181028
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 30th, 2009
Variation: September 1st, 2003
Gene Model: August 13th, 2014
7 months agofht2 flavanone 3-hydroxylase2:
1.04
GRMZM2G382569
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 8th, 2012
Gene Model: June 7th, 2017
7 months agodbb1 double B-box zinc finger protein1:
2.04
GRMZM2G018876
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
7 months agomeg5 maternally expressed gene5: Maternally transmitted alleles preferentially expressed in endosperm
7.01
GRMZM2G354335
Gutierrez-Marcos, J, et al. 2004. Plant Cell. 16:1288-1301     Reference: October 15th, 2009
Variation: August 29th, 2014
Gene Model: June 17th, 2019
7 months agovt2 vanishing tassel2: inflorescence development; TRP-dependent auxin synthesis
 
GRMZM2G127308
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142   AT1G70560 (TAIR) Reference: June 17th, 2019
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
7 months agoga20ox3 gibberellin 20-oxidase3:
 
GRMZM2G368411
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: October 28th, 2014
Gene Model: October 29th, 2014
7 months agodbb7 double B-box zinc finger protein7:
 
GRMZM2G110541
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
7 months agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G107945
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
7 months agotoc2 timing of cab expression2: Ortholog of Arabidopsis toc1
 
GRMZM2G148453
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142   AT5G61380 (TAIR) Reference: June 17th, 2019
Gene Product: January 11th, 2018
Gene Model: January 11th, 2018
7 months agosmk6 small kernel6: encodes a mitochondrion-localized PPR protein that mediates the C-to-U editing at multiple sites
 
GRMZM2G010046
Ding, S et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.152992     Reference: June 14th, 2019
Gene Product: December 27th, 2016
Variation: June 14th, 2019
Gene Model: June 14th, 2019
7 months agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
GRMZM2G068973
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: June 14th, 2019
7 months agodek40 defective kernel40: encodes a cytosol-localized proteasome biogenesis-associated chaperone (PBAC4)
 
GRMZM2G019538
Wang, GF et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01419     Reference: June 13th, 2019
Gene Product: June 13th, 2019
Variation: June 13th, 2019
Gene Model: June 13th, 2019
7 months agodek44 defective kernel44: encodes mitochondrial ribosomal protein L9
 
GRMZM5G866627
Qi, WW et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00546     Reference: June 11th, 2019
Gene Product: June 11th, 2019
Variation: June 11th, 2019
Gene Model: June 11th, 2019
7 months agovg1 vestigial glume1: dominant Vg1 glumes very small, cob and anthers exposed; upper leaves have scant ligules
1.07
GRMZM2G079805
Liu, CX et al. 2019. Crop J. doi: 10.1016/j.cj.2019.04.001     Reference: June 10th, 2019
Gene Product: June 10th, 2019
Variation: September 1st, 2003
Gene Model: June 10th, 2019
7 months agodmp1 DUF679 domain membrane protein1: mutants enhance haploid induction
 
GRMZM2G465053
Zhong, Y et al. 2019. Nature Plants 5:575-580     Reference: June 10th, 2019
Gene Product: June 10th, 2019
Variation: June 10th, 2019
Gene Model: June 10th, 2019
7 months agoras8A1 ras-related protein8A1:
 
GRMZM5G886109
    Variation: January 20th, 2011
Gene Model: June 9th, 2019
7 months agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Heuermann, MC et al. 2019. Plant J pp.doi: 10.1111/tpj.14431     Reference: June 8th, 2019
Gene Product: August 16th, 2012
Variation: June 8th, 2019
Gene Model: November 7th, 2011
7 months agow2 white seedling2: white seedling (yellow with l1); endosperm pitted and spotted (allele dek21); plastid DNA content decreasedChloroplast DNA polymerase. Required for chloroplast DNA replication. (A. Barkan, 2015)
10.07 - 10.07
GRMZM2G480171
Heuermann, MC et al. 2019. Plant J pp.doi: 10.1111/tpj.14431     Reference: June 8th, 2019
Gene Product: September 19th, 2012
Variation: June 8th, 2019
Gene Model: September 19th, 2012
7 months agopcr2 protochlorophyllide reductase2:
 
GRMZM2G036455
Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Gene Model: October 4th, 2017
7 months agopcr3 protochlorophyllide reductase3: localized in chloroplast; overexpression increased tocopherol content in leaves and kernels (Zhan et al., 2019)
 
GRMZM2G073351
Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Variation: June 8th, 2019
Gene Model: October 4th, 2017
7 months agopcr1 protochlorophyllide reductase1: leaf cDNA csu349 similar to plant protochlorophyllide reductase
2.01
GRMZM2G084958
Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Variation: February 25th, 2013
Gene Model: October 8th, 2014
7 months agopin12 PIN-formed protein12: similar to Arabidopsis PIN10 (Forestan et al 2012)
9.02
GRMZM2G160496
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
7 months agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
GRMZM2G129413
Lu, CC et al. 2019. Frontiers Plant Sci 10:716   AT2G21050 (TAIR) Reference: June 6th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
7 months agotar1 tryptophan aminotransferase related1:
6.05
GRMZM2G127160
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
7 months agoabh1 abscisic acid 8'-hydroxylase1:
 
GRMZM2G179147
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: February 15th, 2013
Variation: September 1st, 2011
Gene Model: February 15th, 2013
7 months agoyuc2 Yucca2:
 
GRMZM2G159393
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
7 months agoyuc3 Yucca3: Function of 109945481 is defined as "probable indole-3-pyruvate monooxygenase YUCCA10?? (EHC Jul 2019)
 
GRMZM2G107761
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
7 months agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
GRMZM2G126260
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
7 months agoyuc4 Yucca4: up-regulated by light irradiation in the 0-1mm tip region
 
GRMZM2G141383
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
7 months agoyuc6 Yucca6: transcribed in the root apex (0-5mm)
 
GRMZM2G019515
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
7 months agoyuc7 yucca7:
 
GRMZM2G480386
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
7 months agoyuc8 yucca8:
 
GRMZM2G017193
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
7 months agoprh20 protein phosphatase homolog20:
 
GRMZM2G300125
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
7 months agoabh4 abscisic acid 8'-hydroxylase4:
7.02
GRMZM2G065928
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
7 months agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
GRMZM2G014392
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
7 months agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
GRMZM2G132489
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
7 months agozip1 zinc-regulated, iron-regulated transporter-like protein1:
 
GRMZM2G001803
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
7 months agozip2 zinc-regulated, iron-regulated transporter-like protein2:
 
   Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
7 months agozip3 zinc-regulated, iron-regulated transporter-like protein3:
 
GRMZM2G045849
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
7 months agozip4 zinc-regulated, iron-regulated transporter-like protein4:
 
GRMZM2G111300
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
7 months agozip6 zinc-regulated, iron-regulated transporter-like protein6:
 
GRMZM2G034551
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
7 months agozip7 zinc-regulated, iron-regulated transporter-like protein7:
 
GRMZM2G015955
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
7 months agozip8 zinc-regulated, iron-regulated transporter-like protein8:
 
GRMZM2G093276
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
7 months agoakin2 AKINbetagamma-1 protein kinase2:
1.03
   Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: December 31st, 2018
Variation: September 25th, 2007
7 months agosweet1a sugars will eventually be exported transporter1a:
3.06
GRMZM2G039365
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
7 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 1st, 2003
Variation: September 4th, 2013
7 months agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
GRMZM2G034302
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
7 months agosut2 sucrose transporter2: mutants grow slower and have increased sugar content in leaves
3.04
GRMZM2G307561
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 14th, 2013
Variation: February 20th, 2017
Gene Model: April 17th, 2013
7 months agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
7 months agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
7 months agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
7 months agosweet2 sugars will eventually be exported transporter2: similar to nodulin MtN3-like protein of A. thaliana
 
GRMZM2G324903
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
7 months agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
GRMZM2G112830
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: February 7th, 2018
7 months agosmd1 suppressor of meiotic drive1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
10.06
   Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 7th, 2018
7 months agosmd12 suppressor of meiotic drive12: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 7th, 2018
7 months agoki1 Kindr-RNAi1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 8th, 2018
7 months agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
GRMZM2G165836
Strable, J; Scanlon, MJ. 2016. Nature Genetics. 48:704-5   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene)
Reference: June 2nd, 2019
Gene Product: May 21st, 2016
Variation: April 15th, 2019
Gene Model: May 21st, 2016
7 months agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
7 months agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
GRMZM2G151044
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
7 months agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Shimizu, R; Ji, J; Schnable, PS; Scanlon, MJ. 2009. Annu Rev Plant Physiol Plant Mol Biol. 149:841-50     Reference: June 1st, 2019
Gene Product: August 25th, 2017
Variation: February 20th, 2015
7 months agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
7 months agotrpp13 trehalose-6-phosphate phosphatase13:
 
GRMZM5G890599
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Gene Model: April 2nd, 2019
7 months agotrpp14 trehalose-6-phosphate phosphatase14:
 
   Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
7 months agoras11G1 ras-related protein11G1:
 
AC197246.3_FG001
Zhang, XG et al. 2019. J Plant Biol 62:217-228     Reference: May 31st, 2019
Variation: January 24th, 2011
Gene Model: September 1st, 2017
7 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
7 months agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
7 months agoga2ox1 gibberellin 2-oxidase1: Bolduc and Hake (Plant Cell 21:1647-58, 2009) identify this ga2ox as ga2ox1 by phylogeny. See Supplemental Figure 6. Comparison of syntenic regions containing ga2ox1 in different grasses. They also show that it is a direct target of KN1.
 
GRMZM2G078798
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Variation: November 20th, 2012
Gene Model: November 20th, 2012
7 months agows1 white sheath1: light yellow leaf sheaths; duplicate factor with ws2.
 
   Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
7 months agows3 white sheath3: white leaf sheath, culm, husks; seedlings often virescent
2.01
   Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
7 months agows2 white sheath2: light yellow leaf sheaths; duplicate factor with ws1
 
   Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
7 months agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Variation: July 7th, 2017
7 months agoexpa1 alpha expansin1: belongs to a multigene family and probably exists as a single copy.
3.06
   Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 12th, 2008
Variation: September 1st, 2003
7 months agocki1 cyclin-dependent kinase inhibitor1:
1.08
GRMZM2G116885
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
7 months agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
   Zhang, XR et al. 2019. Plant Sci 283:177-188   AT2G34650 (TAIR) Reference: May 29th, 2019
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
7 months agoga20ox1 gibberellin 20-oxidase1:
1.12
AC203966.5_FG005
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
7 months agoko1 kaurene oxidase1:
 
GRMZM2G059308
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
7 months agoga20ox2 gibberellin 20-oxidase2:
 
GRMZM2G021051
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
7 months agoga2ox8 gibberellin 2-oxidase8:
 
GRMZM2G155686
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
7 months agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
GRMZM2G127949
Zhang, XR et al. 2019. Plant Sci 283:177-188   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR)
Reference: May 29th, 2019
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
7 months agopht10 phosphate transporter protein10:
 
GRMZM2G075870
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
7 months agocki3 cyclin-dependent kinase inhibitor3:
 
GRMZM2G157510
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
7 months agoprh17 protein phosphatase homolog17: responds to Pi starvation
 
GRMZM2G164352
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Variation: April 28th, 2017
Gene Model: April 28th, 2017
7 months agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
GRMZM2G069095
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
7 months agosqd1 sulfolipid biosynthesis1:
 
GRMZM2G053322
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: December 1st, 2018
Gene Model: December 1st, 2018
7 months agomco1 multicopper oxidase1:
 
GRMZM2G086727
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: May 29th, 2019
Gene Model: May 29th, 2019
7 months agotir2 transport inhibitor response2:
 
GRMZM2G155849
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: July 25th, 2017
Gene Model: May 29th, 2019
7 months agovpp9 vacuolar proton pump9:
 
GRMZM2G069410
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: August 16th, 2016
Gene Model: May 29th, 2019
7 months agocki5 cyclin-dependent kinase inhibitor5:
5.07
GRMZM2G101613
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
7 months agomez2 enhancer of zeste2:
9.04
GRMZM5G875502
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: January 13th, 2019
Gene Model: January 13th, 2019
7 months agomez1 enhancer of zeste1:
6.01
   Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: June 30th, 2017
Variation: July 3rd, 2015
7 months agomez3 enhancer of zeste3:
1.03
GRMZM2G043484
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: June 30th, 2017
Variation: September 1st, 2014
Gene Model: September 2nd, 2014
7 months agofie1 fertilization independent endosperm1:
4.05
   Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: December 4th, 2012
7 months agofie2 fertilization independent endosperm2:
10.03
   Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: May 27th, 2014
7 months agonfc103a nucleosome/chromatin assembly factor C:
1.08
GRMZM2G090217
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
7 months agonfc103b nucleosome/chromatin assembly factor C:
5.03
GRMZM2G320606
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
7 months agovef101a  :
7.02
GRMZM2G157422
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: May 27th, 2019
7 months agorbap2 WD-repeat protein RBAP2: first reported as a partial cDNA clone, AF250048, showing high sequence homology with genes rbap1 and rbap3.
3.07
GRMZM2G137965
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 10th, 2012
7 months agonfc104a nucleosome/chromatin assembly factor 104: First identified by the Maize Chromatin Project, who supplied map scores to the Maize Mapping Project towards placement on the CIMDE IBM maps.
7.06
GRMZM2G032711
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
7 months agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Variation: June 22nd, 2005
7 months agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Gene Product: September 10th, 2018
Variation: May 24th, 2019
7 months agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
   Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Gene Product: September 10th, 2018
7 months agodek41 defective kernel41: mutations cause reduced splicing efficiency of mitochondrial nad4 intron 3, resulting in severely reduced complex I assembly and NADH dehydrogenase activity
 
GRMZM2G127015
Ren, RC et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12843     Reference: May 24th, 2019
Gene Product: December 27th, 2016
Variation: May 24th, 2019
Gene Model: April 25th, 2019
7 months agoccp2 cysteine protease2: mRNA differentially enhanced in late- vs. early-senescing lines; similarity to rice oryzain gamma (cysteine protease) and castor bean vacuolar processing enzyme
7.02
   Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: July 30th, 2011
7 months agomir1 maize insect resistance1: single copy cDNA
6.02
   Castano-Duque, L et al. 2017. J Chem Ecol pp.doi: 10.1007/s10886-017-0904-2     Reference: November 21st, 2017
Gene Product: May 23rd, 2019
Variation: November 21st, 2017
7 months agoccp3 cysteine protease3: apoplastic; cysteine protease
10.07
GRMZM2G073465
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: September 1st, 2003
Gene Model: January 16th, 2018
7 months agotraf8 TNF receptor-associated factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.,
 
GRMZM2G026556
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
7 months agotraf7 TNF receptor-associated factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.,
 
GRMZM2G022606
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
7 months agodogt1 deoxynivalenol-glucosyltransferase1:
 
GRMZM2G403740
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
7 months agocxe18 carboxyesterase18:
 
GRMZM2G104141
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
7 months agoccp6 cysteine protease6: novel root specific apoplastic papain-like cysteine protease (PLCP) that shows a distinct substrate specificity and inhibitory profile
 
GRMZM2G340065
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Gene Model: May 23rd, 2019
7 months agoccp4 cysteine protease4: apoplastic; pest defense response
7.03
GRMZM2G108849
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Gene Model: February 13th, 2014
7 months agoccp5 cysteine protease5: apoplastic; response to U. maydis infection
6.01
GRMZM2G066326
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: March 31st, 2005
Gene Model: February 13th, 2014
7 months agoccp1 cysteine protease1: seed cDNA sequence
5.04
   Zaidi, PH et al. 2015. PLoS One 10:e0124350     Reference: April 18th, 2015
Gene Product: May 23rd, 2019
Variation: May 20th, 2015
7 months agothp*-MCP10A thiol protease MCP10A: cDNA sequence similar to barley cysteine protease; copy number less than 5
 
   Pechan, T et al. 1999. Plant Mol Biol 40:111-119     Reference: September 1st, 2003
Gene Product: May 23rd, 2019
8 months agoamt8 ammonium transporter8: similar to Arabidopsis ammonium transporter 2
1.11
GRMZM5G883969
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: October 19th, 2017
8 months agoumc1991  : Similar to Arabidopsis MATE efflux family protein (multidrug and toxic compound extrusion (MATE) family)NCBI: transparent testa 12 protein
1.08
GRMZM5G842695
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: December 27th, 2016
Gene Model: December 27th, 2016
8 months agoumc1995  :
10.04
GRMZM2G343291
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: September 1st, 2003
Gene Model: December 15th, 2017
8 months agonrt2 nitrate transport2:
4.11
GRMZM2G010280
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: May 9th, 2018
Gene Model: May 9th, 2018
8 months agocsu221  :
4.00
GRMZM2G131409
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: September 1st, 2003
Gene Model: April 17th, 2018
8 months agoAI676903  :
5.00
GRMZM5G862317
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: July 29th, 2004
Gene Model: June 13th, 2018
8 months agoamt5 ammonium transporter5:
10.04
GRMZM2G164743
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
8 months agoamt1 ammonium transporter1:
 
GRMZM2G175140
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
8 months agoamt2 ammonium transporter2:
 
GRMZM2G028736
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
8 months agoamt3 ammonium transporter3:
 
GRMZM2G118950
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
8 months agonrt4 nitrate transport4:
 
GRMZM2G163494
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
8 months agonrt3 nitrate transport3:
 
GRMZM2G163866
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
8 months agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0   AT1G12110 (TAIR) Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
8 months agonpf3 nitrate transporter/peptide transporter family3:
 
GRMZM2G112154
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
8 months agonpf4 nitrate transporter/peptide transporter family4:
 
GRMZM2G161483
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
8 months agonpf5 nitrate transporter/peptide transporter family5:
 
GRMZM2G161483
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
8 months agoamt4 ammonium transporter4:
 
GRMZM2G062024
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 10th, 2018
8 months agogpat6 glycerol-3-phosphate acyltransferase6:
 
GRMZM2G033767
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
8 months agonpf6 nitrate transporter/peptide transporter family6:
 
GRMZM2G137421
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agonpf7 nitrate transporter/peptide transporter family7:
 
GRMZM2G064091
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agonpf8 nitrate transporter/peptide transporter family8:
 
GRMZM2G476069
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agonpf9 nitrate transporter/peptide transporter family9:
 
GRMZM2G176253
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agonpf10 nitrate transporter/peptide transporter family10:
 
GRMZM2G044851
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agonpf11 nitrate transporter/peptide transporter family11:
 
GRMZM2G061303
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agonrt5 nitrate transport5:
 
GRMZM2G455124
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
8 months agoamt6 ammonium transporter6:
 
GRMZM2G080045
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
8 months agoamt7 ammonium transporter7:
 
GRMZM2G335218
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
8 months agoamt9 ammonium transporter9:
 
GRMZM2G043193
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
8 months agoamt10 ammonium transporter10:
 
GRMZM2G473697
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
8 months agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0   AT1G12110 (TAIR) Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
8 months agocpd33 carbohydrate partitioning defective33: mutants accumulate excess starch and soluble sugars in mature leaves
 
GRMZM5G852378
Tran, TM et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.05.001     Reference: May 17th, 2019
Gene Product: May 20th, 2019
Variation: May 17th, 2019
Gene Model: May 17th, 2019
8 months agovp15 viviparous15: Viviparous with yellow endosperm; Vp15 encodes a plant MPT synthase small subunit (ZmCNX7)
5.05
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: February 22nd, 2007
Variation: July 27th, 2009
Recommended by Marty Sachs:
March 7th, 2007
8 months agomus2 MutS homolog2: NCBI: DNA mismatch repair protein MSH7
3.02 - 3.03
GRMZM2G110212
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
8 months agoumc1350  :
6.07
GRMZM2G038284
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: September 1st, 2003
Gene Model: August 29th, 2018
8 months agodof25 C2C2-Dof-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: May 15th, 2019
8 months agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: February 20th, 2007
8 months agocyp8 cytochrome P-450 8: developing inflorescence, cDNA clone, assayed in transgenic yeast microsomes
1.08
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   LOC_Os10g26340 (MSU/TIGR) Reference: May 15th, 2019
Gene Product: September 1st, 2003
Variation: October 24th, 2012
8 months agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: May 15th, 2019
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
8 months agoIDP727  : similar to xyloglucan:xyloglucosyl transferase of A. thaliana
7.03
GRMZM2G413044
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: March 31st, 2005
Gene Model: February 5th, 2019
8 months agonldr2 NBS-LRR disease resistance protein2: appears to be involved in the response to Sporisorium reilianum infection
 
GRMZM2G047152
Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: May 14th, 2019
Gene Model: May 14th, 2019
8 months agonldr1 NBS-LRR disease resistance protein1: appears to be involved in the response to Sporisorium reilianum infection
 
GRMZM2G078013
Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: May 14th, 2019
Gene Model: May 14th, 2019
8 months agoemp602 empty pericarp602: mutants have an empty pericarp; loss of mature Nad4 transcripts
 
GRMZM2G464510
Ren, ZJ et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz083   AT1G02420 (TAIR)
LOC_Os03g11020 (MSU/TIGR)
Reference: May 13th, 2019
Gene Product: December 27th, 2016
Variation: May 13th, 2019
Gene Model: May 13th, 2019
8 months agohmg13 HMG-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: May 8th, 2019
8 months agobhlh172 bHLH-transcription factor 172: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Kurt, F et al. 2019. BioMetals doi: 10.1007/s10534-019-00199-z   AT1G51070 (TAIR) Reference: May 8th, 2019
Gene Product: September 14th, 2016
8 months agoaasr3 abscisic acid stress ripening3:
2.04
GRMZM5G806182
Liang, YN et al. 2019. Int J Mol Sci 20:2278     Reference: May 8th, 2019
Gene Product: December 1st, 2011
Gene Model: January 2nd, 2019
8 months agoereb160 AP2-EREBP-transcription factor 160: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.01
GRMZM2G171179
Yu, F et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13140     Reference: May 4th, 2019
Variation: September 1st, 2003
Gene Model: September 25th, 2015
8 months agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Variation: December 6th, 2013
8 months agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
GRMZM2G053177
Wittmeyer, KT, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00546     Reference: May 1st, 2019
Variation: December 19th, 2018
Gene Model: December 19th, 2018
8 months agomyb31 MYB31 transcription factor31: R2R3-MYB factor, regulates lignin genes
 
GRMZM2G050305
Li, M et al. 2019. Mol Biol Rep pp.doi: 10.1007/s11033-019-04840-5   LOC_Os09g36730 (MSU/TIGR) Reference: May 1st, 2019
Gene Product: February 16th, 2011
Variation: May 6th, 2011
Gene Model: November 30th, 2015
8 months agoubi1 ubiquitin1: genomic sequence, 7 contiguous direct ubiquitin repeats; transcript specific probe; promoter active in monocots, not in tobacco
 
GRMZM2G409726
Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Gene Product: September 1st, 2003
Variation: November 20th, 2014
Gene Model: November 18th, 2014
8 months agodof36 C2C2-Dof-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wu, JD et al. 2019. Frontiers Plant Sci 10:465     Reference: May 1st, 2019
Variation: October 7th, 2016
8 months agorbm48 RNA binding motif protein 48: Encodes a U12 splicing factor; mutants have a rough endosperm phenotype
 
GRMZM2G163247
Bai, F, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00754     Reference: May 1st, 2019
Gene Product: March 7th, 2019
Variation: March 7th, 2019