Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is May 5th, 2020.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaymyb75 MYB-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
1.04
   Wang, D, et al. 2020. Genetics. 0:doi: 10.1534/genetics.120.303264     Reference: June 4th, 2020
Variation: September 25th, 2007
yesterdayp1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095; myb homologue
1.03
   Wang, D, et al. 2020. Genetics. 0:doi: 10.1534/genetics.120.303264     Reference: June 4th, 2020
Gene Product: October 13th, 2010
Variation: April 23rd, 2020
yesterdayarr1 ARR-B-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: June 30th, 2017
yesterdaysbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: July 5th, 2019
yesterdaypip1a plasma membrane intrinsic protein1:
2.03
GRMZM2G174807
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
Gene Model: October 29th, 2014
yesterdaypip1b plasma membrane intrinsic protein1:
5.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: April 26th, 2016
yesterdaypip2a plasma membrane intrinsic protein2:
2.03
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: January 25th, 2020
yesterdayelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
yesterdaypip1d plasma membrane intrinsic protein1: differs in nucleotide sequence from pip1c but encodes the same protein.
4.06
GRMZM2G392975
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: October 29th, 2014
Gene Model: October 29th, 2014
yesterdaypip1e plasma membrane intrinsic protein1:
4.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: October 24th, 2014
yesterdaypip1f plasma membrane intrinsic protein1:
9.01
GRMZM2G136032
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 25th, 2020
yesterdaypip2e plasma membrane intrinsic protein2:
7.02
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
yesterdaypip2b plasma membrane intrinsic protein2:
2.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 19th, 2013
yesterdaypip2c plasma membrane intrinsic protein2:
4.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 25th, 2013
yesterdaypip2d plasma membrane intrinsic protein2: member of the aquaporin family
5.05
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 7th, 2007
yesterdaypip2f plasma membrane intrinsic protein2:
7.02
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 26th, 2013
yesterdayphyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: October 24th, 2007
Variation: May 20th, 2020
yesterdayopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
Grover, S et al. 2020. Commun Integr Biol 13:63-66     Reference: June 4th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
yesterdayopr8 12-oxo-phytodienoic acid reductase8: peroxisomal; synthesis of jasmonic acid
4.05
GRMZM2G082087
Grover, S et al. 2020. Commun Integr Biol 13:63-66     Reference: June 4th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
yesterdayme8 NAD-dependent malic enzyme8: White and red light decreased the quantity of mRNA, while far-red light led to the increase of its transcripts
 
GRMZM2G085747
Eprintsev, AT et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153193     Reference: June 4th, 2020
Gene Product: June 4th, 2020
Gene Model: June 4th, 2020
yesterdayme9 NAD-dependent malic enzyme9: White and red light increased the quantity of mRNA, while far-red light led to the decrease of its transcripts
7.03
GRMZM2G406672
Eprintsev, AT et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153193     Reference: June 4th, 2020
Gene Product: June 4th, 2020
Gene Model: June 4th, 2020
2 days agoMuk Mu killer: Mu killer methylates mutator TIRs and acts dominantly to silence active Mutator systems.
 
   Burgess, D et al. 2020. Genetics 215:379-391     Reference: June 3rd, 2020
Variation: November 12th, 2004
2 days agonad5 (mito) NADH dehydrogenase subunit 5:
 
   Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: September 1st, 2003
2 days agoppr101 pentatricopeptide repeat potein101: Loss-of-function mutation impairs seed development
 
GRMZM2G023999
Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: December 27th, 2016
Variation: June 3rd, 2020
Gene Model: June 3rd, 2020
2 days agoppr231 pentatricopeptide repeat potein231: Loss-of-function mutation impairs seed development
 
GRMZM2G018757
Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: December 27th, 2016
Variation: June 3rd, 2020
Gene Model: June 3rd, 2020
3 days agondhB-II (cp) nicotinamide adenine dinucleotide dehydrogenaseB2: ndhB-II 9(cp) is a duplication of ndhB-I (cp); see ndhB-I (cp) entry for complete information
 
GRMZM5G810298
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 2nd, 2020
3 days agondhB-I (cp) nicotinamide adenine dinucleotide dehydrogenaseB1: Maier et al, 1992, contains an analysis of RNA editing sites as regarding a "consensus" recognition site for editing across organisms and genomes.
 
GRMZM5G876106
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 2nd, 2020
3 days agokw9 kernel weight9: Involved in kernel weight variation
 
GRMZM2G171994
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: December 27th, 2016
Gene Model: June 2nd, 2020
4 days agoms23 male sterile23: pollen mother cells degeneratedominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.02
GRMZM2G021276
Zheng, MM et al. 2020. G3 pp.doi: 10.1534/g3.120.401192     Reference: June 1st, 2020
Gene Product: September 14th, 2016
Variation: September 6th, 2019
Gene Model: December 4th, 2016
4 days agosbei1 starch branching enzyme IIb interacting protein1: knocking out this and sbei2 genes using the CRISPR/Cas9 system could effectively increase the apparent amylose content but maintain the maize kernel weight.
 
GRMZM2G089553
Chen, C et al. 2020. Can J Plant Sci pp.doi: 10.1139/CJPS-2019-0219     Reference: June 1st, 2020
Gene Product: June 1st, 2020
Gene Model: June 1st, 2020
4 days agosbei2 starch branching enzyme IIb interacting protein2: knocking out this and sbei1 genes using the CRISPR/Cas9 system could effectively increase the apparent amylose content but maintain the maize kernel weight.
 
GRMZM2G091494
Chen, C et al. 2020. Can J Plant Sci pp.doi: 10.1139/CJPS-2019-0219     Reference: June 1st, 2020
Gene Product: June 1st, 2020
Gene Model: June 1st, 2020
6 days agophd5 PHD-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.10
GRMZM2G057265
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2017
Variation: September 25th, 2007
Gene Model: May 30th, 2020
7 days agoAY104784  :
4.08
GRMZM2G179737
    Variation: March 2nd, 2007
Gene Model: May 29th, 2020
7 days agoAY107128  :
4.05
GRMZM2G145951
    Variation: September 25th, 2007
Gene Model: May 29th, 2020
9 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Munoz-Clares, RA et al. 2020. Biochem J pp.doi: 10.1042/BCJ20200304     Reference: May 27th, 2020
Gene Product: September 1st, 2003
Variation: May 27th, 2020
9 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Wu, XY et al. 2020. Acta Agriculturae Jiangxi 32:35-41     Reference: May 27th, 2020
Gene Product: June 4th, 2008
Variation: May 27th, 2020
10 days agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
10 days agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps4 trehalose-6-phosphate synthase4:
 
GRMZM2G008226
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps5 trehalose-6-phosphate synthase5:
 
GRMZM2G527891
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps9 trehalose-6-phosphate synthase9:
 
GRMZM2G366659
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps10 trehalose-6-phosphate synthase10:
 
GRMZM2G312521
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrps15 trehalose-6-phosphate synthase15:
 
GRMZM2G118462
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
10 days agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
GRMZM2G112830
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: February 7th, 2018
10 days agoIDP217  :
5.09
GRMZM2G143627
    Variation: March 31st, 2005
Gene Model: May 26th, 2020
11 days agodek55 defective kernel55: Enclodes a Mitochondrial E-subgroup PPR Protein
 
AC201815.4_FG001
Ren, RC et al. 2020. BMC Plant Biology pp.doi: 10.21203/rs.3.rs-26875/v1     Reference: May 25th, 2020
Gene Product: December 27th, 2016
Variation: May 25th, 2020
Gene Model: May 25th, 2020
12 days agoumc1375  :
5.07
GRMZM2G118366
    Variation: September 1st, 2003
Gene Model: May 24th, 2020
12 days agocl17982_1a  :
5.06
GRMZM5G832989
    Variation: September 25th, 2007
Gene Model: May 24th, 2020
12 days agoIDP3821  :
5.06
GRMZM2G385999
    Variation: March 31st, 2005
Gene Model: May 24th, 2020
13 days agoumc1028  :
2.05
GRMZM2G115658
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Variation: September 1st, 2003
Gene Model: February 15th, 2018
13 days agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G075562
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: May 23rd, 2020
13 days agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Perveen, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa248     Reference: May 23rd, 2020
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
13 days agoks1 kaurene synthase1:
 
GRMZM2G016922
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
13 days agoga2ox12 gibberellin 2-oxidase12:
 
GRMZM2G177104
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
13 days agopco087990  :
5.06
GRMZM2G108087
    Variation: September 25th, 2007
Gene Model: May 23rd, 2020
13 days agoIDP737  :
5.07
GRMZM2G339943
    Variation: March 31st, 2005
Gene Model: May 23rd, 2020
13 days agoIDP89  :
5.06
GRMZM2G029029
    Variation: March 31st, 2005
Gene Model: May 23rd, 2020
14 days agomha2 plasma-membrane H+ATPase2: cDNA sequence similar to plant plasma-membrane [H+]-ATPase and distinct from mha1
2.02
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
14 days agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
GRMZM2G136910
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: January 2nd, 2019
Variation: December 30th, 2011
Gene Model: November 1st, 2011
14 days agoplt2 phospholipid transfer protein homolog2: amino acid sequence, deduced from coleoptile cDNA; SSR locus umc1010
3.09
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
14 days agofbn1 fibrillin1: leaf cDNA csu653, moderate copy number, similar to plastid protein
1.05
GRMZM2G003318
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
14 days agomdh1 malate dehydrogenase1: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
8.03
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
14 days agomdh2 malate dehydrogenase2: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
6.07
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
14 days agomdh4 malate dehydrogenase4: electrophoretic mobility; null allele is known; cytosolic; dimeric; intra/interlocus hybrid bands occur; probed by csu77
1.08
   Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: May 22nd, 2020
14 days agoumc1995  :
10.04
GRMZM2G343291
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: September 1st, 2003
Gene Model: December 15th, 2017
14 days agobgaf1 beta glucosidase aggregating factor1:
7.02
GRMZM2G172204
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: October 23rd, 2013
Gene Model: October 24th, 2011
14 days agogst41 glutathione transferase41:
6.05
GRMZM2G097989
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2010
Gene Model: July 27th, 2016
14 days agopsbD (cp)  :
 
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
14 days agonad1 NADH ubiquinone oxidoreductase1: endosperm cDNA 5C05D10 (uaz266), similar to a NADH-ubiquinone oxidoreductase subunit
1.03
GRMZM2G018941
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 4th, 2016
14 days agomstr1 monosaccharide transporter1:
7.00
GRMZM2G135739
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: July 14th, 2008
Gene Model: September 17th, 2015
14 days agoimd2 isopropylmalate dehydrogenase2:
 
GRMZM5G803490
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2014
Gene Model: July 22nd, 2014
14 days agopld5 phospholipase D5:
 
GRMZM2G442551
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: August 9th, 2016
Gene Model: August 9th, 2016
14 days agoIDP2361  :
5.05
GRMZM2G112352
    Variation: March 31st, 2005
Gene Model: May 22nd, 2020
14 days agoIDP758  :
5.05
GRMZM2G061938
    Variation: March 31st, 2005
Gene Model: May 22nd, 2020
14 days agogpm480  :
4.02
GRMZM2G138907
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: September 25th, 2007
Gene Model: April 11th, 2020
14 days agopco093974b  :
5.03
GRMZM2G053236
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: June 3rd, 2014
Gene Model: May 9th, 2013
14 days agopsei3 cystatin3:
6.06
GRMZM2G440968
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: April 21st, 2008
Variation: February 24th, 2009
Gene Model: July 28th, 2016
15 days agoms45 male sterile45: abnormal microspore wall formation, tassel specific, cDNA clone
9.06
   Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: June 27th, 2014
Variation: June 27th, 2014
15 days agoms33 male sterile33:
2.09
GRMZM2G070304
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   LOC_Os11g45400 (MSU/TIGR) Reference: May 21st, 2020
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
15 days agoms6021 male sterile6021: mutants are male sterile; encodes a fatty-acyl-CoA reductase
9.04 - 9.06
GRMZM2G120987
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: December 1st, 2017
Variation: December 1st, 2017
Gene Model: December 1st, 2017
15 days agoms20 male sterile20: mutants are male sterile and exhibit a glossy outer anther surface, abnormal Ubish bodies, and defective pollen exinedegeneration obvious by mid-vacuolated microspore stage
1.00 - 1.05
GRMZM2G434500
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   AT1G12570 (TAIR) Reference: May 21st, 2020
Gene Product: November 16th, 2016
Variation: March 20th, 2019
Gene Model: November 16th, 2016
15 days agoms26 male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage
1.02 - 1.02
   Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: September 30th, 2013
Variation: September 27th, 2013
15 days agobm3 brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific
4.04
GRMZM5G814904
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: February 16th, 2011
Variation: October 27th, 2015
Gene Model: May 21st, 2020
15 days agomdh3 malate dehydrogenase3: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
3.08
GRMZM2G466833
Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 30th, 2015
15 days agomdh5 malate dehydrogenase5: electrophoretic mobility, null allele is known; cytosolic; dimeric, intra/interlocus hybrid bands occur; cDNA csu249 single copy
5.03
   Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
15 days agoms10 male sterile10: like ms5; affected at microspore vacuolationsimilar to Arabidopsis cytochrome P450, family 703, subfamily A, polypeptide 2
10.04 - 10.05
GRMZM5G830329
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   AT1G01280 (TAIR)
LOC_Os08g03682 (MSU/TIGR)
Reference: May 21st, 2020
Gene Product: January 20th, 2017
Variation: January 19th, 2017
Gene Model: January 19th, 2017
15 days agoms44 male sterile44: dominant Ms44 plants male sterile
4.08
AC225127.3_FG003
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: January 6th, 2017
Gene Model: January 6th, 2017
15 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
15 days agots2 tassel seed2: like ts1, but tassel branches variably pistillate and staminate; sequence homologous to short chain alcohol dehydrogenases; SSR phi001
1.03
   Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
15 days agots5 tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base
4.03 - 4.05
GRMZM2G177668
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: March 25th, 2019
Variation: March 25th, 2019
Gene Model: March 25th, 2019
15 days agoms30 male sterile30: like ms1
4.08
GRMZM2G174782
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
15 days agomdh6 malate dehydrogenase6: mesophyll cells, C4 photosynthesis; a second copy may not function in photosynthesis
1.07
GRMZM2G129513
Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 23rd, 2014
Variation: August 31st, 2010
Gene Model: October 24th, 2013
15 days agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G471240
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: March 14th, 2017
Variation: February 10th, 2017
Gene Model: January 25th, 2017
15 days agokcs3 3-ketoacyl-CoA synthase3:
 
GRMZM2G075140
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
15 days agokcs11 3-ketoacyl-CoA synthase11:
 
GRMZM2G149636
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
15 days agoIDP290  :
5.05
GRMZM2G398500
    Variation: March 31st, 2005
Gene Model: May 21st, 2020
15 days agoIDP335  :
5.05
GRMZM2G171406
    Variation: March 31st, 2005
Gene Model: May 21st, 2020
16 days agomyb103 MYB-transcription factor 103: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.06
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: September 25th, 2007
16 days agocsu861  :
2.03
GRMZM2G001241
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: September 1st, 2003
Gene Model: March 13th, 2020
16 days agosacd11 stearoyl-acyl-carrier-protein desaturase11:
10.04
AC215690.3_FG002
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
16 days agosacd3 stearoyl-acyl-carrier-protein desaturase3:
1.05
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 10th, 2016
Variation: November 3rd, 2017
16 days agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
GRMZM2G167438
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Variation: February 13th, 2020
Gene Model: February 13th, 2020
16 days agogl1 glossy1: cuticle wax altered; leaf surface bright, water adheres
7.02
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2006
16 days agogl2 glossy2: like gl1, but surface wax is all rice-grain-type particles
2.02
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117   AT4G24510 (TAIR) Reference: May 20th, 2020
Gene Product: February 28th, 2020
Variation: December 7th, 2012
16 days agogl4 glossy4: (was gl16) like gl1, but surface wax has reduced number of star-type particles
4.06
GRMZM2G003501
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Variation: November 1st, 2018
Gene Model: October 31st, 2018
16 days agogl8 glossy8: (was gl10) like gl1; cuticle wax in rice-grain-type particles; cDNA probesimilar to Arabidopsis beta-ketoacyl reductase 1
5.05
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: September 1st, 2003
Variation: June 14th, 2012
16 days agoumc1177  : nonspecific lipid-transfer protein identified in CERES sequences
1.01
GRMZM2G137329
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: March 9th, 2016
Gene Model: March 9th, 2016
16 days agoumc1318  :
10.01
GRMZM2G093997
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: September 1st, 2003
Gene Model: September 16th, 2017
16 days agoumc1411a  : NCBI: anther-specific proline-rich protein APGNCBI: similar to Arabidopsis GDSL esterase/lipase
1.09
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: September 1st, 2003
16 days agoumc1447  :
5.03
GRMZM2G137694
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
16 days agogl13 glossy13: necrotic glossy leaf; plants that survive to maturity are sterile (both male and female) and smaller than nonmutant sibs.Ortholog of Poales ATP-binding cassette transporter, PDR-like subfamily G, domain 1
 
GRMZM2G118243
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: December 28th, 2015
Variation: December 19th, 2013
Gene Model: December 9th, 2013
16 days agoumc1594  :
3.09
GRMZM2G107839
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: September 1st, 2003
Gene Model: September 16th, 2017
16 days agomyb151 MYB-transcription factor 151: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117   AT4G37780 (TAIR) Reference: May 20th, 2020
Gene Product: July 25th, 2017
16 days agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: July 24th, 2017
Variation: July 24th, 2017
16 days agoltpg1 glycosylphosphatidylinositol-anchored lipid protein transfer1: NCBI: putative bifunctional inhibitor/LTP/seed storage protein family
1.06
GRMZM2G083725
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: September 1st, 2003
Variation: December 2nd, 2016
Gene Model: December 2nd, 2016
16 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 24th, 2007
Variation: May 19th, 2020
16 days agophyA1 phytochromeA1: red/far red light signal receptor; major phytochrome A transcript in seedling leaf blade, sheath and mesocotyl under dark light conditions; is greatly reduced in white or red light. See also phyA2, phyB1, phyB2, phyC1, phyC2.
1.10
GRMZM2G157727
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: June 30th, 2009
Variation: September 25th, 2007
Gene Model: August 13th, 2014
16 days agophyA2 phytochromeA2: red/far red light signal receptor; minor phytochrome A trancript in dark grown seedling leaf blade, sheath, mesocotyl. See also phyA1, phyB1, phyB2, phyC1, phyC2
5.01
GRMZM2G181028
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: June 30th, 2009
Variation: September 1st, 2003
Gene Model: August 13th, 2014
16 days agogpat1 glycerol-3-phosphate acyltransferase1:
3.06
GRMZM2G083195
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: March 25th, 2019
Variation: March 23rd, 2015
Gene Model: March 24th, 2015
16 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
16 days agokcs13 3-ketoacyl-CoA synthase13:
1.02
GRMZM2G445602
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Gene Model: September 2nd, 2018
16 days agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
GRMZM2G481843
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
16 days agogte102 global transcription factor group E:
5.05
GRMZM2G006707
    Variation: September 1st, 2003
Gene Model: May 20th, 2020
16 days agocer8 eceriferum8: mutant seedlings displayed a typical glossy phenotype
10.03
GRMZM2G101875
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117   AT2G47240 (TAIR) Reference: May 20th, 2020
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: January 23rd, 2018
16 days agotil2 temperature-induced lipocalin2:
1.07
GRMZM2G124307
Charron, J-BF et al. 2005. Plant Physiol 139:2017-2028     Reference: May 20th, 2020
Gene Product: May 20th, 2020
Gene Model: February 12th, 2020
16 days agopht1 phosphate transporter protein1:
5.03
GRMZM2G326707
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
16 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
16 days agopht3 phosphate transporter protein3: similar to Arabidosis inorganic phosphate transporter 1-4
 
GRMZM2G045473
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: December 28th, 2010
Gene Model: May 27th, 2015
16 days agopht4 phosphate transporter protein4:
10.04
GRMZM2G159075
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: July 14th, 2008
Gene Model: May 27th, 2015
16 days agoeil3 ethylene insensitive-like3:
1.04
GRMZM2G033570
Yang, Z et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13803     Reference: May 20th, 2020
Variation: August 6th, 2008
Gene Model: August 29th, 2013
16 days agopht7 phosphate transporter protein7:
 
GRMZM2G112377
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
16 days agopht6 phosphate transporter protein6:
 
GRMZM5G881088
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Gene Model: May 27th, 2015
16 days agopht10 phosphate transporter protein10:
 
GRMZM2G075870
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
16 days agopht9 phosphate transporter protein9:
 
GRMZM2G070087
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
16 days agosacd5 stearoyl-acyl-carrier-protein desaturase5:
 
GRMZM2G026793
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
16 days agosacd7 stearoyl-acyl-carrier-protein desaturase7:
 
GRMZM2G073540
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
16 days agoggt1 geranylgeranyl transferase1: when expressed in maize callus, it adds more resistance to maize insect pests and ear rot fungi
 
GRMZM2G151087
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: January 9th, 2018
Gene Model: January 8th, 2018
16 days agogpat7 glycerol-3-phosphate acyltransferase7:
 
GRMZM2G064590
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
16 days agogpat20 glycerol-3-phosphate acyltransferase20:
 
GRMZM2G075295
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
16 days agocyp28 cytochrome P-450 28:
 
GRMZM2G132478
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: March 25th, 2019
Gene Model: January 7th, 2020
16 days agokcs19 3-ketoacyl-CoA synthase19:
 
GRMZM2G062718
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
16 days agokcs9 3-ketoacyl-CoA synthase9:
 
GRMZM2G104626
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
16 days agokcs22 3-ketoacyl-CoA synthase22:
 
GRMZM2G168956
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
16 days agokcs24 3-ketoacyl-CoA synthase24:
 
GRMZM5G894016
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
16 days agocer1 eceriferum1:
 
GRMZM2G075255
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
16 days agocer2 eceriferum2:
 
GRMZM2G029912
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
16 days agolacs2 long chain acyl-CoA synthetase2:
 
GRMZM2G104847
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: October 31st, 2018
Gene Model: February 13th, 2020
16 days agogll1 glossy2-like1: strong homology to maize gl2 and Arabidopsis cer2.
 
GRMZM2G315767
Alexander, LE et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00241   AT4G13840 (TAIR) Reference: May 20th, 2020
Gene Product: February 28th, 2020
Gene Model: February 28th, 2020
16 days agoIDP2589  :
2.07
GRMZM2G102878
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Variation: March 31st, 2005
Gene Model: February 20th, 2019
16 days agoplt3 phospholipid transfer protein homolog3:
3.06
GRMZM2G126397
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: September 1st, 2003
Variation: January 8th, 2017
Gene Model: January 6th, 2017
16 days agoIDP2140  :
5.05
GRMZM2G128902
    Variation: March 31st, 2005
Gene Model: May 20th, 2020
16 days agoabcg11 ABC transporter G family member 11: Ortholog of Arabidopsis ABCG11/COF1/WBC11. Plasma membrane-localized ATP-binding cassette transporter; cutin transport to extracellular matrix. (A. Barkan, 2015)Ortholog of Arabidopsis ABCG11/COF1/WBC11, a plasma membrane- localized ATP-binding cassette transporter; cutin transport to extracellular matrix
2.02
GRMZM2G177812
Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: December 28th, 2015
Variation: December 30th, 2015
Gene Model: February 17th, 2015
16 days agotil1 temperature-induced lipocalin1:
5.05
GRMZM2G072034
Charron, J-BF et al. 2005. Plant Physiol 139:2017-2028     Reference: May 20th, 2020
Gene Product: May 20th, 2020
Gene Model: May 20th, 2020
16 days agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: June 30th, 2009
Variation: June 30th, 2009
16 days agophyC2 phytochromeC2: red/far red light signal receptor; minor phytochrome C transcript in seedling leaf blade, sheath, mesocotyl. See also phyC1, phyA1, phyA2 phyB1, phyB2.
5.01
   Qiao, P et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2004945117     Reference: May 20th, 2020
Gene Product: June 30th, 2009
Variation: June 30th, 2009
17 days agoumc1687  :
5.05
GRMZM2G029922
    Variation: September 1st, 2003
Gene Model: May 19th, 2020
17 days agopht5 phosphate transporter protein5:
 
GRMZM2G041595
Li, WD et al. 2020. Planta 251:106     Reference: May 19th, 2020
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
17 days agoIDP333  :
5.05
GRMZM2G056988
    Variation: March 31st, 2005
Gene Model: May 19th, 2020
18 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Cui, ZH et al. 2020. Sci. Rep. 10:8165   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: May 18th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
18 days agoAY105205  :
5.04
GRMZM2G135691
    Variation: September 25th, 2007
Gene Model: May 18th, 2020
20 days agoIDP1623  :
5.04
GRMZM2G167356
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
20 days agoIDP207  :
5.04
GRMZM2G109315
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
20 days agoIDP359  :
5.04
GRMZM2G060167
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
21 days agors1 rough sheath1: shoot meristem and developing stem specific; dominant Rs1 plants have extreme ligule disorganization (aka kn2)
7.00
GRMZM2G028041
Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 30th, 2015
Variation: November 18th, 2013
Gene Model: September 30th, 2015
21 days agors2 rough sheath2: short, zigzag plants with warty, distorted sheaths and leaves
1.05
   Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 1st, 2003
Variation: May 9th, 2009
21 days agovp8 viviparous8: embryo fails to become dormant; chlorophyll and carotenoids unaffected; small, pointed-leaf seedlings
1.11
   Anderson, SL, II et al. 2020. Plant Direct 4:e00223     Reference: May 15th, 2020
Gene Product: November 29th, 2012
Variation: June 4th, 2018
21 days agohstf2 heat shock transcription factor2: pollen cDNA similar to eucaryotic heat shock factor
8.09
GRMZM2G118453
Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
Variation: December 23rd, 2012
Gene Model: July 28th, 2016
21 days agohstf1 heat shock transcription factor1: embryo cDNA similar to eucaryotic heat shock factor; multiple copies; gene-specific primers
 
   Gagliardi, D et al. 1995. Plant Mol Biol 29:841-856     Reference: September 1st, 2003
Gene Product: May 15th, 2020
21 days agohstf3 heat shock transcription factor 3: pollen cDNA similar to eucaryotic heat shock factor
 
   Gagliardi, D et al. 1995. Plant Mol Biol 29:841-856     Reference: September 1st, 2003
Gene Product: May 15th, 2020
21 days agoumc1283  :
5.04
GRMZM2G094353
    Variation: September 1st, 2003
Gene Model: May 15th, 2020
21 days agohsftf1 HSF-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf10 HSF-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf12 HSF-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf13 HSF-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf14 HSF-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-2 of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf15 HSF-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf16 HSF-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf17 HSF-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf18 HSF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf19 HSF-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf2 HSF-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf20 HSF-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf21 HSF-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf22 HSF-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-1b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf23 HSF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf24 HSF-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf25 HSF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf27 HSF-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf28 HSF-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf29 HSF-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-5 of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf3 HSF-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-6b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf4 HSF-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf5 HSF-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-1b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf6 HSF-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf7 HSF-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor B-2b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf8 HSF-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to heat stress transcription factor B-2b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agohsftf9 HSF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
21 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Variation: October 5th, 2018
21 days agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
GRMZM2G151044
Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 15th, 2013
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
21 days agotsh1 tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles.
6.07
   Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: December 6th, 2019
Variation: October 6th, 2011
21 days agohsftf11 HSF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.11
GRMZM2G132971
Zhang, H-N et al. 2020. Sci. Rep. 10:8073   AT2G26150 (TAIR) Reference: May 15th, 2020
Gene Product: May 15th, 2020
Gene Model: October 13th, 2017
21 days agohsftf31 HSF-transcription factor 31:
 
GRMZM2G051448
Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
Gene Model: May 15th, 2020
21 days agohsftf30 HSF-transcription factor 30:
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
22 days agocdj3 chaperone DNA J3: NCBI: putative dnaJ chaperone family protein
5.03
GRMZM2G134980
Wu, YB et al. 2020. BMC Genomics 21:357     Reference: May 14th, 2020
Variation: March 24th, 2017
Gene Model: March 24th, 2017
22 days agoumc1110  :
5.04
GRMZM2G382914
    Variation: September 1st, 2003
Gene Model: May 14th, 2020
22 days agobhlh86 bHLH-transcription factor 86: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM5G818643
Wu, YB et al. 2020. BMC Genomics 21:357     Reference: May 14th, 2020
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
22 days agoadf7 actin depolymerizing factor7:
 
GRMZM2G463471
Wu, YB et al. 2020. BMC Genomics 21:357     Reference: May 14th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
22 days agopco096212  :
5.04
GRMZM2G322129
    Variation: September 25th, 2007
Gene Model: May 14th, 2020
23 days agovpp2 vacuolar proton pump2: etiolated leaf cDNA, 5' sequence similar to plant vacuolar ATPase, subunit B
9.03
GRMZM2G094497
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: May 15th, 2015
Gene Model: May 15th, 2015
23 days agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
23 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: August 16th, 2012
Variation: May 13th, 2020
Gene Model: November 7th, 2011
23 days agobrk3 brick3: Involved in formation of epidermal cell lobes as well as for properly polarized divisions of stomatal subsidiary mother cells.
10.01 - 10.02
GRMZM2G180150
Wang, YC et al. 2020. BMC Genomics 21:353   AT2G35110 (TAIR)
Os08G0544500 (Gramene)
Reference: May 13th, 2020
Gene Product: August 12th, 2015
Variation: August 12th, 2015
Gene Model: August 11th, 2015
23 days agonnr2 nitrate reductase2: partial cDNA from seedling root cDNA similar to nitrate reductase
5.07
GRMZM5G878558
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2010
Gene Model: May 10th, 2018
23 days agonlp6 NLP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: December 3rd, 2019
23 days agomha4 proton-exporting ATPase4:
10.07
GRMZM2G006894
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: December 14th, 2017
Gene Model: December 14th, 2017
23 days agocsu36b(rpL19)  :
5.04
GRMZM5G887054
Keith, CS et al. 1993. Plant Physiol 101:329-332     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: May 13th, 2020
23 days agogln4 glutamine synthetase4: cytosolic GS1-3 isoform, major species in both root and leaf, gene specific cDNA probes, 6-member nuclear gene family; SSR phi085
5.06
   Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
23 days agonii2 nitrite reductase2: cDNA homologous to spinach gene, induced by nitrate, putative chloroplast transit peptide, two copies
4.07
GRMZM2G079381
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 10th, 2014
23 days agorboh1 respiratory burst oxidase1: mutant displays defects in root hair initiation and elongation manifested by a reduced density and length of root hairs.
3.06
GRMZM2G426953
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: July 15th, 2013
Variation: June 7th, 2014
Gene Model: July 2nd, 2013
23 days agorboh3 respiratory burst oxidase3:
 
GRMZM2G043435
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
23 days agonrt1 nitrate transport1:
 
GRMZM2G010251
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
23 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Variation: August 15th, 2017
Gene Model: August 15th, 2017
23 days agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
GRMZM2G172152
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
23 days agonhx1 Na+/H+ antiporter 1: root-specific and NaCl-specific expression.
 
   Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: August 25th, 2018
23 days agorboh2 respiratory burst oxidase2:
3.07
GRMZM2G138152
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
24 days agoaasr6 abscisic acid stress ripening6:
5.04
GRMZM2G057841
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: January 2nd, 2019
Variation: November 12th, 2014
Gene Model: November 1st, 2011
24 days agoinvan2 invertase alkaline neutral2:
5.05
GRMZM2G118737
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: June 12th, 2018
Variation: September 1st, 2003
Gene Model: July 10th, 2018
24 days agoacco3 1-aminocyclopropane-1-carboxylate oxidase3:
 
GRMZM2G166616
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
24 days agoacco4 1-aminocyclopropane-1-carboxylate oxidase4:
 
GRMZM2G332423
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
24 days agonpf6 nitrate transporter/peptide transporter family6:
 
GRMZM2G137421
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
24 days agoIDP51  :
5.05
   Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Variation: September 25th, 2007
24 days agomagi2594  :
1.11
GRMZM2G352415
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Variation: April 24th, 2006
Gene Model: February 16th, 2020
25 days agolg2 liguleless2: like lg1, less extreme
3.06
   Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
25 days agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: September 20th, 2012
Variation: October 5th, 2012
25 days agoumc1274  :
5.03
GRMZM2G053500
    Variation: September 1st, 2003
Gene Model: May 11th, 2020
25 days agoumc1373  :
5.03
GRMZM2G132060
    Variation: September 1st, 2003
Gene Model: May 11th, 2020
25 days agoarid7 ARID-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G466270
Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
Gene Model: May 11th, 2020
25 days agoamt5 ammonium transporter5:
10.04
GRMZM2G164743
Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
25 days agoIDP101  :
5.03
GRMZM2G165351
    Variation: March 31st, 2005
Gene Model: May 11th, 2020
25 days agoIDP1604  :
5.03
GRMZM2G112805
    Variation: March 31st, 2005
Gene Model: May 11th, 2020
25 days agorpl44 ribosomal protein L44: vegetative meristem cDNA 7C02A07
7.03
GRMZM2G009412
Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: September 1st, 2003
Variation: January 24th, 2009
Gene Model: June 1st, 2017
26 days agocl3313_1  :
5.03
GRMZM2G089119
    Variation: September 25th, 2007
Gene Model: May 10th, 2020
26 days agopco113787  :
5.03
GRMZM5G854533
    Variation: September 25th, 2007
Gene Model: May 10th, 2020
26 days agoIDP1672  :
5.03
GRMZM2G099452
    Variation: March 31st, 2005
Gene Model: May 10th, 2020
27 days agoal1 albescent plant1: variably cross-banded to white leaves, pale yellow endosperm, some alleles viviparous; y3 is allelic
2.01
   Hunter, Charles et al. 2020. Maize Genetics Conference Abstracts 62:P138     Reference: May 9th, 2020
Variation: April 11th, 2011
27 days agoIDP1660  :
5.03
GRMZM2G048205
    Variation: March 31st, 2005
Gene Model: May 9th, 2020
28 days agomips1 myo-inositol phosphate synthase1: encodes myo-inositol phosphate synthase; may be involved in kernel phytic acid levels
1.02
GRMZM2G155242
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: July 13th, 2019
Variation: April 30th, 2011
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
28 days agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
   Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
28 days agoast91 anti-sigma factor antagonist domain of sulfate transporter91:
2.02
GRMZM2G395114
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249   AT1G23090 (TAIR)
LOC_Os04g55800 (MSU/TIGR)
Reference: May 8th, 2020
Gene Product: May 8th, 2020
Variation: February 2nd, 2018
Gene Model: February 2nd, 2018
28 days agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: October 25th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
28 days agosfp5 sulfate transporter5:
9.02
GRMZM2G444801
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: March 14th, 2018
28 days agosfp1 sulfate permease1:
1.02
GRMZM2G159632
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: February 3rd, 2015
28 days agoaprl1 adenosine 5'-phosphosulfate reductase-like1: Involved in Sulfur homeostasis
7.03
AC189750.4_FG004
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: October 10th, 2017
Variation: January 13th, 2016
Gene Model: December 18th, 2015
28 days agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
GRMZM2G087254
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
28 days agosfp2 sulfate transporter2:
 
GRMZM2G080178
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
28 days agosfp4 sulfate transporter4:
 
GRMZM2G154211
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
28 days agosfp6 sulfate transporter6:
 
GRMZM2G158013
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
28 days agosfp7 sulfate transporter7:
 
GRMZM2G068212
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
28 days agoaga1 alkaline galactosidase1:
 
GRMZM2G340656
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
28 days agosfp8 sulfate transporter8:
 
GRMZM2G342907
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: May 8th, 2020
28 days agomips2 myo-inositol phosphate synthase2:
 
GRMZM2G004528
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: July 13th, 2019
Gene Model: May 8th, 2020
28 days agoIDP486  :
5.03
GRMZM2G026216
    Variation: March 31st, 2005
Gene Model: May 8th, 2020
28 days agoIDP628  :
5.03
GRMZM2G156748
    Variation: March 31st, 2005
Gene Model: May 8th, 2020
28 days agosir1 sulfite reductase1:
 
GRMZM2G090338
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: September 1st, 2003
Variation: January 26th, 2011
Gene Model: July 28th, 2016
28 days agogols3 galactinol synthase3: Expressed late in seed developmentExpressed during post-imbibition dehydration stress
9.04
GRMZM5G872256
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
28 days agosfp3 sulfate transporter3:
1.02
GRMZM2G042171
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
29 days agonactf87 NAC-transcription factor 87: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, XG et al. 2020. BMC Plant Biology 20:196     Reference: May 7th, 2020
Gene Product: July 8th, 2019
29 days agocesa2 cellulose synthase2: cDNA
6.05
   Liu, XG et al. 2020. BMC Plant Biology 20:196     Reference: May 7th, 2020
Gene Product: October 7th, 2016
Variation: October 9th, 2012
29 days agopox3 guaiacol peroxidase3:
6.05
GRMZM2G135108
Liu, XG et al. 2020. BMC Plant Biology 20:196     Reference: May 7th, 2020
Gene Product: September 1st, 2003
Variation: January 7th, 2016
Gene Model: February 9th, 2015
29 days agopco090715  :
5.03
GRMZM2G067306
    Variation: September 25th, 2007
Gene Model: May 7th, 2020
30 days agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: September 4th, 2013
30 days agoumc1118  :
1.11
GRMZM2G012224
Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Variation: September 21st, 2016
Gene Model: October 19th, 2017
30 days agopdc3 pyruvate decarboxylase3: cDNA sequence, gene-specific probe
1.03
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
30 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stagnati, L et al. 2020. G3 10:1685-1696   LOC_Os1g67410 (MSU/TIGR) Reference: May 6th, 2020
Gene Product: July 5th, 2019
30 days agoca2p5 CCAAT-HAP2-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: August 9th, 2016
30 days agotubtf10 TUB-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 29th, 2015
30 days agogrp3 glycine-rich protein3: single or low copy number cDNA;
5.03
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
30 days agocpn1 chaperonin 1: cDNA sequence homologous to hsp60 family; 2 copies
5.03
GRMZM2G458208
Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: May 20th, 2015
Gene Model: May 20th, 2015
30 days agoyab6 C2C2-YABBY-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G074124
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Variation: May 6th, 2020
Gene Model: July 3rd, 2012
30 days agoburp2 BURP domain-containing protein-RD22-like2: Water deficit caused a 1.6-fold increase in the expression; expression up-regulated by ABA.
 
GRMZM5G800586
Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
30 days agoIDP337  :
5.02
GRMZM2G079083
    Variation: March 31st, 2005
Gene Model: May 6th, 2020

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